Hb_173660_010

Information

Type -
Description -
Location Contig173660: 3-829
Sequence    

Annotation

kegg
ID mdm:103410094
description probable receptor-like protein kinase At1g67000
nr
ID XP_008347079.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Malus domestica]
swissprot
ID -
description -
trembl
ID F6H856
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0424g00020 PE=4 SV=1
Gene Ontology
ID GO:0016772
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_173660_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Malus domestica]
2 Hb_000934_260 0.1158689799 - - Thylakoid lumenal 29.8 kDa protein, chloroplast precursor, putative [Ricinus communis]
3 Hb_137600_010 0.1254289873 - - 50S ribosomal protein L1p, putative [Ricinus communis]
4 Hb_001689_050 0.125676138 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
5 Hb_005074_050 0.1290435714 - - PREDICTED: myosin-6-like [Jatropha curcas]
6 Hb_004208_090 0.1332560836 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
7 Hb_110252_010 0.1380082345 - - hypothetical protein JCGZ_16705 [Jatropha curcas]
8 Hb_003683_030 0.1397431303 - - PREDICTED: uridine-cytidine kinase C isoform X1 [Jatropha curcas]
9 Hb_001999_260 0.1449152988 - - PREDICTED: 50S ribosomal protein L4, chloroplastic [Jatropha curcas]
10 Hb_024066_040 0.149868291 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
11 Hb_001250_040 0.150064836 - - hypothetical protein CISIN_1g018444mg [Citrus sinensis]
12 Hb_005000_060 0.1506026443 - - PREDICTED: uncharacterized protein LOC105637867 [Jatropha curcas]
13 Hb_005288_180 0.1521381289 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic isoform X1 [Jatropha curcas]
14 Hb_000637_070 0.1530920562 - - PREDICTED: uncharacterized protein LOC105650668 [Jatropha curcas]
15 Hb_002107_040 0.1536269462 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
16 Hb_000099_170 0.1538650561 - - PREDICTED: uncharacterized protein LOC105645733 [Jatropha curcas]
17 Hb_148146_010 0.156476597 - - coproporphyrinogen III oxidase [Ziziphus jujuba]
18 Hb_000322_030 0.1567829254 - - PREDICTED: uncharacterized protein LOC105637911 [Jatropha curcas]
19 Hb_005015_020 0.1586252342 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
20 Hb_126933_020 0.1591334842 - - PREDICTED: uncharacterized protein LOC105638525 [Jatropha curcas]

Gene co-expression network

sample Hb_173660_010 Hb_173660_010 Hb_000934_260 Hb_000934_260 Hb_173660_010--Hb_000934_260 Hb_137600_010 Hb_137600_010 Hb_173660_010--Hb_137600_010 Hb_001689_050 Hb_001689_050 Hb_173660_010--Hb_001689_050 Hb_005074_050 Hb_005074_050 Hb_173660_010--Hb_005074_050 Hb_004208_090 Hb_004208_090 Hb_173660_010--Hb_004208_090 Hb_110252_010 Hb_110252_010 Hb_173660_010--Hb_110252_010 Hb_000934_260--Hb_004208_090 Hb_000637_070 Hb_000637_070 Hb_000934_260--Hb_000637_070 Hb_000322_040 Hb_000322_040 Hb_000934_260--Hb_000322_040 Hb_001999_260 Hb_001999_260 Hb_000934_260--Hb_001999_260 Hb_050514_020 Hb_050514_020 Hb_000934_260--Hb_050514_020 Hb_006846_160 Hb_006846_160 Hb_000934_260--Hb_006846_160 Hb_000479_210 Hb_000479_210 Hb_137600_010--Hb_000479_210 Hb_003602_030 Hb_003602_030 Hb_137600_010--Hb_003602_030 Hb_004324_120 Hb_004324_120 Hb_137600_010--Hb_004324_120 Hb_137600_010--Hb_001999_260 Hb_005488_190 Hb_005488_190 Hb_137600_010--Hb_005488_190 Hb_001250_040 Hb_001250_040 Hb_001689_050--Hb_001250_040 Hb_003683_030 Hb_003683_030 Hb_001689_050--Hb_003683_030 Hb_007594_080 Hb_007594_080 Hb_001689_050--Hb_007594_080 Hb_003894_060 Hb_003894_060 Hb_001689_050--Hb_003894_060 Hb_004837_210 Hb_004837_210 Hb_001689_050--Hb_004837_210 Hb_001953_100 Hb_001953_100 Hb_001689_050--Hb_001953_100 Hb_148146_010 Hb_148146_010 Hb_005074_050--Hb_148146_010 Hb_005074_050--Hb_004837_210 Hb_005074_050--Hb_003683_030 Hb_003664_030 Hb_003664_030 Hb_005074_050--Hb_003664_030 Hb_003640_050 Hb_003640_050 Hb_005074_050--Hb_003640_050 Hb_000056_310 Hb_000056_310 Hb_005074_050--Hb_000056_310 Hb_004208_090--Hb_001999_260 Hb_004117_150 Hb_004117_150 Hb_004208_090--Hb_004117_150 Hb_006681_020 Hb_006681_020 Hb_004208_090--Hb_006681_020 Hb_004855_070 Hb_004855_070 Hb_004208_090--Hb_004855_070 Hb_000768_120 Hb_000768_120 Hb_004208_090--Hb_000768_120 Hb_005015_020 Hb_005015_020 Hb_110252_010--Hb_005015_020 Hb_000069_500 Hb_000069_500 Hb_110252_010--Hb_000069_500 Hb_024066_040 Hb_024066_040 Hb_110252_010--Hb_024066_040 Hb_005288_180 Hb_005288_180 Hb_110252_010--Hb_005288_180 Hb_000136_020 Hb_000136_020 Hb_110252_010--Hb_000136_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.30784 5.98587 21.148 8.2053 2.55243 1.38783
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.784182 0.246387 1.22664 0.879286 18.4671

CAGE analysis