Hb_174168_010

Information

Type -
Description -
Location Contig174168: 192-725
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at4g36180

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174168_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_001369_460 0.077471542 - - vacuolar invertase [Manihot esculenta]
3 Hb_007520_050 0.0856070774 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
4 Hb_000947_010 0.08934929 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
5 Hb_003043_130 0.0944880365 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF2-like [Jatropha curcas]
6 Hb_002391_030 0.0979545606 - - hypothetical protein CISIN_1g020187mg [Citrus sinensis]
7 Hb_040718_010 0.0986217715 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
8 Hb_006938_060 0.1024783155 - - nutrient reservoir, putative [Ricinus communis]
9 Hb_003101_020 0.1025116927 transcription factor TF Family: NAC PREDICTED: NAC transcription factor NAM-B2 [Jatropha curcas]
10 Hb_174899_010 0.1119434484 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
11 Hb_004602_010 0.1127602102 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
12 Hb_062807_010 0.1170744892 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
13 Hb_005535_070 0.1177350551 - - conserved hypothetical protein [Ricinus communis]
14 Hb_008705_030 0.1181431828 - - hypothetical protein JCGZ_13017 [Jatropha curcas]
15 Hb_006267_040 0.122108019 - - PREDICTED: ABC transporter G family member 32 isoform X1 [Jatropha curcas]
16 Hb_001439_050 0.1232573552 - - plastocyanin-like domain-containing family protein [Populus trichocarpa]
17 Hb_005050_030 0.1240736378 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
18 Hb_000866_060 0.1262492119 - - putative glycerol-3-phosphate acyltransferase [Vernicia fordii]
19 Hb_000109_140 0.1308589553 - - hypothetical protein CICLE_v100314482mg, partial [Citrus clementina]
20 Hb_000239_050 0.1343352616 - - PREDICTED: cyclin-D5-1-like [Jatropha curcas]

Gene co-expression network

sample Hb_174168_010 Hb_174168_010 Hb_001369_460 Hb_001369_460 Hb_174168_010--Hb_001369_460 Hb_007520_050 Hb_007520_050 Hb_174168_010--Hb_007520_050 Hb_000947_010 Hb_000947_010 Hb_174168_010--Hb_000947_010 Hb_003043_130 Hb_003043_130 Hb_174168_010--Hb_003043_130 Hb_002391_030 Hb_002391_030 Hb_174168_010--Hb_002391_030 Hb_040718_010 Hb_040718_010 Hb_174168_010--Hb_040718_010 Hb_001369_460--Hb_040718_010 Hb_001369_460--Hb_007520_050 Hb_001369_460--Hb_000947_010 Hb_006938_060 Hb_006938_060 Hb_001369_460--Hb_006938_060 Hb_001369_460--Hb_003043_130 Hb_003101_020 Hb_003101_020 Hb_007520_050--Hb_003101_020 Hb_001439_050 Hb_001439_050 Hb_007520_050--Hb_001439_050 Hb_062807_010 Hb_062807_010 Hb_007520_050--Hb_062807_010 Hb_005305_160 Hb_005305_160 Hb_007520_050--Hb_005305_160 Hb_000947_010--Hb_003043_130 Hb_005575_010 Hb_005575_010 Hb_000947_010--Hb_005575_010 Hb_005181_190 Hb_005181_190 Hb_000947_010--Hb_005181_190 Hb_067558_010 Hb_067558_010 Hb_000947_010--Hb_067558_010 Hb_000866_060 Hb_000866_060 Hb_000947_010--Hb_000866_060 Hb_003043_130--Hb_000866_060 Hb_003453_060 Hb_003453_060 Hb_003043_130--Hb_003453_060 Hb_003043_130--Hb_005575_010 Hb_000759_040 Hb_000759_040 Hb_003043_130--Hb_000759_040 Hb_000239_050 Hb_000239_050 Hb_003043_130--Hb_000239_050 Hb_005535_070 Hb_005535_070 Hb_002391_030--Hb_005535_070 Hb_002835_310 Hb_002835_310 Hb_002391_030--Hb_002835_310 Hb_007545_070 Hb_007545_070 Hb_002391_030--Hb_007545_070 Hb_000424_130 Hb_000424_130 Hb_002391_030--Hb_000424_130 Hb_001516_010 Hb_001516_010 Hb_002391_030--Hb_001516_010 Hb_174899_010 Hb_174899_010 Hb_002391_030--Hb_174899_010 Hb_040718_010--Hb_006938_060 Hb_005050_030 Hb_005050_030 Hb_040718_010--Hb_005050_030 Hb_002151_150 Hb_002151_150 Hb_040718_010--Hb_002151_150 Hb_040718_010--Hb_000947_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0533499 2.85327 1.05189 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.548931 1.61807

CAGE analysis