Hb_174380_010

Information

Type -
Description -
Location Contig174380: 2-658
Sequence    

Annotation

kegg
ID rcu:RCOM_1617430
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002511965.1
description kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RE26
description Kinase, putative OS=Ricinus communis GN=RCOM_1617430 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated receptor kinase-like 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_174380_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_009083_010 0.1027437967 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
3 Hb_006634_080 0.1056865259 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b [Jatropha curcas]
4 Hb_117127_010 0.1076538244 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
5 Hb_000338_030 0.1122270184 transcription factor TF Family: HB hypothetical protein JCGZ_21254 [Jatropha curcas]
6 Hb_000133_060 0.1161277981 - - PREDICTED: protein YLS9-like [Jatropha curcas]
7 Hb_012545_080 0.1190677334 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
8 Hb_000996_200 0.1198687319 - - PREDICTED: (+)-neomenthol dehydrogenase-like [Populus euphratica]
9 Hb_006698_020 0.1199957303 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
10 Hb_022206_030 0.121111167 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
11 Hb_008667_030 0.1215095331 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
12 Hb_002410_010 0.1222183366 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
13 Hb_005357_270 0.1241773752 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
14 Hb_007433_020 0.1264573388 - - hypothetical protein VITISV_005320 [Vitis vinifera]
15 Hb_002284_020 0.1279687441 - - PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
16 Hb_029866_050 0.1291888732 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
17 Hb_157980_010 0.1380783978 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
18 Hb_000098_250 0.1381622791 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]
19 Hb_001568_120 0.1383577054 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
20 Hb_004459_110 0.1388576781 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_174380_010 Hb_174380_010 Hb_009083_010 Hb_009083_010 Hb_174380_010--Hb_009083_010 Hb_006634_080 Hb_006634_080 Hb_174380_010--Hb_006634_080 Hb_117127_010 Hb_117127_010 Hb_174380_010--Hb_117127_010 Hb_000338_030 Hb_000338_030 Hb_174380_010--Hb_000338_030 Hb_000133_060 Hb_000133_060 Hb_174380_010--Hb_000133_060 Hb_012545_080 Hb_012545_080 Hb_174380_010--Hb_012545_080 Hb_022206_030 Hb_022206_030 Hb_009083_010--Hb_022206_030 Hb_009083_010--Hb_006634_080 Hb_005357_270 Hb_005357_270 Hb_009083_010--Hb_005357_270 Hb_009083_010--Hb_000133_060 Hb_000252_080 Hb_000252_080 Hb_009083_010--Hb_000252_080 Hb_000996_200 Hb_000996_200 Hb_006634_080--Hb_000996_200 Hb_157980_010 Hb_157980_010 Hb_006634_080--Hb_157980_010 Hb_006634_080--Hb_005357_270 Hb_000110_330 Hb_000110_330 Hb_006634_080--Hb_000110_330 Hb_000098_250 Hb_000098_250 Hb_117127_010--Hb_000098_250 Hb_008667_030 Hb_008667_030 Hb_117127_010--Hb_008667_030 Hb_002410_010 Hb_002410_010 Hb_117127_010--Hb_002410_010 Hb_002529_080 Hb_002529_080 Hb_117127_010--Hb_002529_080 Hb_006615_180 Hb_006615_180 Hb_117127_010--Hb_006615_180 Hb_000000_070 Hb_000000_070 Hb_117127_010--Hb_000000_070 Hb_020648_020 Hb_020648_020 Hb_000338_030--Hb_020648_020 Hb_000338_030--Hb_002410_010 Hb_000338_030--Hb_008667_030 Hb_000338_030--Hb_000098_250 Hb_000338_030--Hb_002529_080 Hb_000338_030--Hb_117127_010 Hb_007407_010 Hb_007407_010 Hb_000133_060--Hb_007407_010 Hb_002205_260 Hb_002205_260 Hb_000133_060--Hb_002205_260 Hb_000133_060--Hb_000110_330 Hb_000133_060--Hb_012545_080 Hb_019961_010 Hb_019961_010 Hb_000133_060--Hb_019961_010 Hb_012545_080--Hb_000996_200 Hb_012545_080--Hb_005357_270 Hb_012545_080--Hb_000110_330 Hb_009683_010 Hb_009683_010 Hb_012545_080--Hb_009683_010 Hb_012545_080--Hb_007407_010 Hb_012404_050 Hb_012404_050 Hb_012545_080--Hb_012404_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.69543 0.786087 0.802255 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0695402 0 0.766201 0.136403

CAGE analysis