Hb_176825_010

Information

Type -
Description -
Location Contig176825: 1-951
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012068231.1
description PREDICTED: uncharacterized protein LOC105630857 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16038 PE=4 SV=1
Gene Ontology
ID GO:0000166
description PREDICTED: uncharacterized protein LOC105630857 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16967: 63-381 , PASA_asmbl_16968: 158-439
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_176825_010 0.0 - - PREDICTED: uncharacterized protein LOC105630857 isoform X2 [Jatropha curcas]
2 Hb_174473_010 0.235694332 - - PREDICTED: uncharacterized protein LOC105775505 [Gossypium raimondii]
3 Hb_004899_060 0.2422630097 - - 46 kDa ketoavyl-ACP synthase [Ricinus communis]
4 Hb_003881_050 0.2462541252 - - PREDICTED: uncharacterized protein LOC104213140 [Nicotiana sylvestris]
5 Hb_038011_010 0.2474905503 - - hypothetical protein POPTR_0031s004401g, partial [Populus trichocarpa]
6 Hb_004724_230 0.2586763911 - - hypothetical protein JCGZ_12701 [Jatropha curcas]
7 Hb_002686_380 0.2595224898 - - -
8 Hb_000256_070 0.2628029642 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial [Jatropha curcas]
9 Hb_000085_080 0.2642239828 - - PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]
10 Hb_048116_010 0.2645798229 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
11 Hb_073452_010 0.2670887451 - - PREDICTED: chaperonin CPN60-like 2, mitochondrial isoform X2 [Jatropha curcas]
12 Hb_000566_030 0.2683650922 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
13 Hb_000928_050 0.268885883 - - PREDICTED: DNA polymerase delta subunit 4 [Jatropha curcas]
14 Hb_001242_090 0.2699734505 - - 40S ribosomal protein S18 [Colletotrichum fioriniae PJ7]
15 Hb_003688_160 0.2772997494 - - Presenilin-like family protein [Populus trichocarpa]
16 Hb_008159_010 0.2783876213 - - PREDICTED: 66 kDa stress protein [Jatropha curcas]
17 Hb_000442_080 0.2788486577 - - hypothetical protein JCGZ_03373 [Jatropha curcas]
18 Hb_006911_050 0.2822762231 - - PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]
19 Hb_000853_400 0.2826774469 - - PREDICTED: CTP synthase [Jatropha curcas]
20 Hb_000422_120 0.2831453626 - - PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Jatropha curcas]

Gene co-expression network

sample Hb_176825_010 Hb_176825_010 Hb_174473_010 Hb_174473_010 Hb_176825_010--Hb_174473_010 Hb_004899_060 Hb_004899_060 Hb_176825_010--Hb_004899_060 Hb_003881_050 Hb_003881_050 Hb_176825_010--Hb_003881_050 Hb_038011_010 Hb_038011_010 Hb_176825_010--Hb_038011_010 Hb_004724_230 Hb_004724_230 Hb_176825_010--Hb_004724_230 Hb_002686_380 Hb_002686_380 Hb_176825_010--Hb_002686_380 Hb_010427_010 Hb_010427_010 Hb_174473_010--Hb_010427_010 Hb_003781_010 Hb_003781_010 Hb_174473_010--Hb_003781_010 Hb_000159_100 Hb_000159_100 Hb_174473_010--Hb_000159_100 Hb_004224_020 Hb_004224_020 Hb_174473_010--Hb_004224_020 Hb_003688_160 Hb_003688_160 Hb_174473_010--Hb_003688_160 Hb_002099_080 Hb_002099_080 Hb_174473_010--Hb_002099_080 Hb_001366_120 Hb_001366_120 Hb_004899_060--Hb_001366_120 Hb_005976_050 Hb_005976_050 Hb_004899_060--Hb_005976_050 Hb_004899_060--Hb_003688_160 Hb_001143_190 Hb_001143_190 Hb_004899_060--Hb_001143_190 Hb_031862_130 Hb_031862_130 Hb_004899_060--Hb_031862_130 Hb_008695_140 Hb_008695_140 Hb_004899_060--Hb_008695_140 Hb_003881_050--Hb_038011_010 Hb_001242_090 Hb_001242_090 Hb_003881_050--Hb_001242_090 Hb_085863_020 Hb_085863_020 Hb_003881_050--Hb_085863_020 Hb_073452_010 Hb_073452_010 Hb_003881_050--Hb_073452_010 Hb_090497_010 Hb_090497_010 Hb_003881_050--Hb_090497_010 Hb_003881_050--Hb_003688_160 Hb_038011_010--Hb_090497_010 Hb_038011_010--Hb_073452_010 Hb_048116_010 Hb_048116_010 Hb_038011_010--Hb_048116_010 Hb_011287_090 Hb_011287_090 Hb_038011_010--Hb_011287_090 Hb_099864_010 Hb_099864_010 Hb_038011_010--Hb_099864_010 Hb_002326_050 Hb_002326_050 Hb_038011_010--Hb_002326_050 Hb_000422_120 Hb_000422_120 Hb_004724_230--Hb_000422_120 Hb_054127_050 Hb_054127_050 Hb_004724_230--Hb_054127_050 Hb_002513_030 Hb_002513_030 Hb_004724_230--Hb_002513_030 Hb_004553_020 Hb_004553_020 Hb_004724_230--Hb_004553_020 Hb_001660_020 Hb_001660_020 Hb_004724_230--Hb_001660_020 Hb_001523_020 Hb_001523_020 Hb_004724_230--Hb_001523_020 Hb_001703_120 Hb_001703_120 Hb_002686_380--Hb_001703_120 Hb_002733_030 Hb_002733_030 Hb_002686_380--Hb_002733_030 Hb_003861_020 Hb_003861_020 Hb_002686_380--Hb_003861_020 Hb_025457_010 Hb_025457_010 Hb_002686_380--Hb_025457_010 Hb_001965_010 Hb_001965_010 Hb_002686_380--Hb_001965_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.129904 0.156743 0.315692 0.856652 0.432527 1.67677
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.104752 2.48649 1.00121 0.588012

CAGE analysis