Hb_176979_010

Information

Type -
Description -
Location Contig176979: 2-673
Sequence    

Annotation

kegg
ID rcu:RCOM_1318870
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_012071397.1
description PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067DLY8
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0434241mg PE=3 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_176979_010 0.0 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
2 Hb_146023_010 0.091107743 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_064885_050 0.1328260818 - - PREDICTED: BAHD acyltransferase At5g47980-like [Populus euphratica]
4 Hb_125644_010 0.1345671695 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
5 Hb_002917_010 0.1390519388 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
6 Hb_001442_080 0.1418928423 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
7 Hb_000939_030 0.1439554433 - - PREDICTED: F-box protein At3g07870-like [Jatropha curcas]
8 Hb_064398_010 0.1458665976 - - cytochrome P450, putative [Ricinus communis]
9 Hb_010712_020 0.1523826706 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
10 Hb_001047_250 0.1545707185 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
11 Hb_001863_290 0.1550297015 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
12 Hb_107258_010 0.1553117868 - - hypothetical protein JCGZ_01141 [Jatropha curcas]
13 Hb_000189_260 0.1553224479 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000135_050 0.1578471376 - - PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like isoform X2 [Citrus sinensis]
15 Hb_004564_010 0.160985863 - - receptor-kinase, putative [Ricinus communis]
16 Hb_039655_010 0.1620331779 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
17 Hb_004204_160 0.1623365716 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]
18 Hb_012660_010 0.1650822602 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
19 Hb_011824_010 0.1657878146 - - Metalloendoproteinase 1 precursor, putative [Ricinus communis]
20 Hb_001288_010 0.1661148695 - - -

Gene co-expression network

sample Hb_176979_010 Hb_176979_010 Hb_146023_010 Hb_146023_010 Hb_176979_010--Hb_146023_010 Hb_064885_050 Hb_064885_050 Hb_176979_010--Hb_064885_050 Hb_125644_010 Hb_125644_010 Hb_176979_010--Hb_125644_010 Hb_002917_010 Hb_002917_010 Hb_176979_010--Hb_002917_010 Hb_001442_080 Hb_001442_080 Hb_176979_010--Hb_001442_080 Hb_000939_030 Hb_000939_030 Hb_176979_010--Hb_000939_030 Hb_010712_020 Hb_010712_020 Hb_146023_010--Hb_010712_020 Hb_064398_010 Hb_064398_010 Hb_146023_010--Hb_064398_010 Hb_146023_010--Hb_002917_010 Hb_146023_010--Hb_000939_030 Hb_001047_250 Hb_001047_250 Hb_146023_010--Hb_001047_250 Hb_064885_050--Hb_146023_010 Hb_064885_050--Hb_000939_030 Hb_009230_040 Hb_009230_040 Hb_064885_050--Hb_009230_040 Hb_011856_010 Hb_011856_010 Hb_064885_050--Hb_011856_010 Hb_139460_010 Hb_139460_010 Hb_064885_050--Hb_139460_010 Hb_115007_010 Hb_115007_010 Hb_125644_010--Hb_115007_010 Hb_007342_020 Hb_007342_020 Hb_125644_010--Hb_007342_020 Hb_125644_010--Hb_146023_010 Hb_000537_120 Hb_000537_120 Hb_125644_010--Hb_000537_120 Hb_125644_010--Hb_064398_010 Hb_001357_260 Hb_001357_260 Hb_002917_010--Hb_001357_260 Hb_000189_260 Hb_000189_260 Hb_002917_010--Hb_000189_260 Hb_000976_020 Hb_000976_020 Hb_002917_010--Hb_000976_020 Hb_002965_020 Hb_002965_020 Hb_002917_010--Hb_002965_020 Hb_002917_010--Hb_064398_010 Hb_107258_010 Hb_107258_010 Hb_001442_080--Hb_107258_010 Hb_001863_290 Hb_001863_290 Hb_001442_080--Hb_001863_290 Hb_004564_010 Hb_004564_010 Hb_001442_080--Hb_004564_010 Hb_178389_020 Hb_178389_020 Hb_001442_080--Hb_178389_020 Hb_001442_080--Hb_064398_010 Hb_000483_020 Hb_000483_020 Hb_001442_080--Hb_000483_020 Hb_000939_030--Hb_000976_020 Hb_000939_030--Hb_010712_020 Hb_000939_030--Hb_107258_010 Hb_000140_260 Hb_000140_260 Hb_000939_030--Hb_000140_260 Hb_002110_270 Hb_002110_270 Hb_000939_030--Hb_002110_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.89624 0.107361 0.390682 0.047208 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.743728 15.0954 0.328951

CAGE analysis