Hb_178049_010

Information

Type -
Description -
Location Contig178049: 4308-5508
Sequence    

Annotation

kegg
ID cic:CICLE_v10002149mg
description hypothetical protein
nr
ID XP_012071365.1
description PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
swissprot
ID Q42556
description ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2
trembl
ID A0A067DRX4
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040798mg PE=4 SV=1
Gene Ontology
ID GO:0000166
description serine threonine-protein kinase-like protein ccr3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178049_010 0.0 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
2 Hb_002171_020 0.0740135619 - - protein phosphatase 2a, regulatory subunit, putative [Ricinus communis]
3 Hb_005648_020 0.0903414271 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
4 Hb_003466_010 0.0953589693 - - PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Jatropha curcas]
5 Hb_122951_010 0.0954484581 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
6 Hb_009736_020 0.1014864487 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]
7 Hb_004558_060 0.1015272414 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
8 Hb_006154_010 0.1025379223 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
9 Hb_002522_040 0.1035201218 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
10 Hb_000834_130 0.1052219205 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002809_080 0.1120124721 - - conserved hypothetical protein [Ricinus communis]
12 Hb_149055_010 0.1120358436 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
13 Hb_000076_280 0.1128096297 - - PREDICTED: pectinesterase-like [Populus euphratica]
14 Hb_000329_010 0.1135258277 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
15 Hb_002370_050 0.1140654415 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
16 Hb_008021_050 0.1153532135 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_009189_100 0.1156477821 - - PREDICTED: patellin-6 [Jatropha curcas]
18 Hb_000419_140 0.1163326717 - - Aquaporin PIP2.1, putative [Ricinus communis]
19 Hb_092975_010 0.1169162423 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
20 Hb_002518_020 0.1180327442 - - PREDICTED: uncharacterized protein LOC105631164 [Jatropha curcas]

Gene co-expression network

sample Hb_178049_010 Hb_178049_010 Hb_002171_020 Hb_002171_020 Hb_178049_010--Hb_002171_020 Hb_005648_020 Hb_005648_020 Hb_178049_010--Hb_005648_020 Hb_003466_010 Hb_003466_010 Hb_178049_010--Hb_003466_010 Hb_122951_010 Hb_122951_010 Hb_178049_010--Hb_122951_010 Hb_009736_020 Hb_009736_020 Hb_178049_010--Hb_009736_020 Hb_004558_060 Hb_004558_060 Hb_178049_010--Hb_004558_060 Hb_009189_100 Hb_009189_100 Hb_002171_020--Hb_009189_100 Hb_000329_720 Hb_000329_720 Hb_002171_020--Hb_000329_720 Hb_000005_360 Hb_000005_360 Hb_002171_020--Hb_000005_360 Hb_002171_020--Hb_004558_060 Hb_015934_080 Hb_015934_080 Hb_002171_020--Hb_015934_080 Hb_005648_020--Hb_003466_010 Hb_003607_080 Hb_003607_080 Hb_005648_020--Hb_003607_080 Hb_005648_020--Hb_009736_020 Hb_003849_170 Hb_003849_170 Hb_005648_020--Hb_003849_170 Hb_000093_010 Hb_000093_010 Hb_005648_020--Hb_000093_010 Hb_170077_020 Hb_170077_020 Hb_005648_020--Hb_170077_020 Hb_003466_010--Hb_000093_010 Hb_000866_130 Hb_000866_130 Hb_003466_010--Hb_000866_130 Hb_036520_030 Hb_036520_030 Hb_003466_010--Hb_036520_030 Hb_012132_050 Hb_012132_050 Hb_003466_010--Hb_012132_050 Hb_008021_050 Hb_008021_050 Hb_003466_010--Hb_008021_050 Hb_043630_030 Hb_043630_030 Hb_122951_010--Hb_043630_030 Hb_017862_030 Hb_017862_030 Hb_122951_010--Hb_017862_030 Hb_002522_040 Hb_002522_040 Hb_122951_010--Hb_002522_040 Hb_005111_020 Hb_005111_020 Hb_122951_010--Hb_005111_020 Hb_000849_030 Hb_000849_030 Hb_122951_010--Hb_000849_030 Hb_000020_210 Hb_000020_210 Hb_122951_010--Hb_000020_210 Hb_009736_020--Hb_004558_060 Hb_009736_020--Hb_002171_020 Hb_002918_270 Hb_002918_270 Hb_009736_020--Hb_002918_270 Hb_009252_080 Hb_009252_080 Hb_009736_020--Hb_009252_080 Hb_001369_190 Hb_001369_190 Hb_004558_060--Hb_001369_190 Hb_004558_060--Hb_005648_020 Hb_002518_020 Hb_002518_020 Hb_004558_060--Hb_002518_020 Hb_004558_060--Hb_002918_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.83937 4.19154 12.4918 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.81239 3.46299

CAGE analysis