Hb_178051_070

Information

Type -
Description -
Location Contig178051: 60146-62062
Sequence    

Annotation

kegg
ID rcu:RCOM_1240130
description protein binding protein, putative
nr
ID XP_012078692.1
description PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
swissprot
ID Q9FGH9
description Exocyst complex component EXO70B1 OS=Arabidopsis thaliana GN=EXO70B1 PE=1 SV=1
trembl
ID A0A067LLW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17362 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 042_H07.ab1: 60132-60848

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178051_070 0.0 - - PREDICTED: exocyst complex component EXO70B1-like [Jatropha curcas]
2 Hb_000700_060 0.0991284582 - - PREDICTED: uncharacterized protein LOC105644416 [Jatropha curcas]
3 Hb_023226_080 0.1008054563 transcription factor TF Family: C3H PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1 [Jatropha curcas]
4 Hb_004032_040 0.1041002081 - - unknown [Medicago truncatula]
5 Hb_000169_170 0.1072055432 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
6 Hb_002284_170 0.1080637981 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
7 Hb_010712_090 0.1085962631 - - PREDICTED: uncharacterized protein LOC105631276 [Jatropha curcas]
8 Hb_178968_050 0.1088778111 - - PREDICTED: probable serine incorporator [Jatropha curcas]
9 Hb_001019_180 0.1093657743 - - PREDICTED: uncharacterized protein LOC105639324 [Jatropha curcas]
10 Hb_013749_020 0.1100949014 - - PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1 [Jatropha curcas]
11 Hb_000949_010 0.1109769411 - - PREDICTED: regulator of nonsense transcripts UPF2 [Jatropha curcas]
12 Hb_000571_160 0.111582057 - - PREDICTED: ubiquitin-activating enzyme E1 1-like [Jatropha curcas]
13 Hb_000608_230 0.1116375766 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Jatropha curcas]
14 Hb_004785_030 0.1121983907 transcription factor TF Family: bZIP PREDICTED: transcription factor VIP1 [Jatropha curcas]
15 Hb_000823_030 0.1128117702 - - PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha curcas]
16 Hb_000352_070 0.1141169166 - - Potassium transporter, putative [Ricinus communis]
17 Hb_000949_020 0.1141489258 transcription factor TF Family: Orphans PREDICTED: ethylene receptor isoform X2 [Jatropha curcas]
18 Hb_111889_010 0.1141641093 - - PREDICTED: DNA ligase 4 [Jatropha curcas]
19 Hb_000237_190 0.1148184201 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X1 [Jatropha curcas]
20 Hb_000862_040 0.1149085641 - - ara4-interacting protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_178051_070 Hb_178051_070 Hb_000700_060 Hb_000700_060 Hb_178051_070--Hb_000700_060 Hb_023226_080 Hb_023226_080 Hb_178051_070--Hb_023226_080 Hb_004032_040 Hb_004032_040 Hb_178051_070--Hb_004032_040 Hb_000169_170 Hb_000169_170 Hb_178051_070--Hb_000169_170 Hb_002284_170 Hb_002284_170 Hb_178051_070--Hb_002284_170 Hb_010712_090 Hb_010712_090 Hb_178051_070--Hb_010712_090 Hb_002119_090 Hb_002119_090 Hb_000700_060--Hb_002119_090 Hb_004785_030 Hb_004785_030 Hb_000700_060--Hb_004785_030 Hb_006738_050 Hb_006738_050 Hb_000700_060--Hb_006738_050 Hb_000700_060--Hb_002284_170 Hb_004410_070 Hb_004410_070 Hb_000700_060--Hb_004410_070 Hb_000059_020 Hb_000059_020 Hb_000700_060--Hb_000059_020 Hb_005542_140 Hb_005542_140 Hb_023226_080--Hb_005542_140 Hb_000176_100 Hb_000176_100 Hb_023226_080--Hb_000176_100 Hb_000069_410 Hb_000069_410 Hb_023226_080--Hb_000069_410 Hb_159558_010 Hb_159558_010 Hb_023226_080--Hb_159558_010 Hb_000012_260 Hb_000012_260 Hb_023226_080--Hb_000012_260 Hb_009615_170 Hb_009615_170 Hb_023226_080--Hb_009615_170 Hb_000703_200 Hb_000703_200 Hb_004032_040--Hb_000703_200 Hb_012368_100 Hb_012368_100 Hb_004032_040--Hb_012368_100 Hb_000094_320 Hb_000094_320 Hb_004032_040--Hb_000094_320 Hb_120470_010 Hb_120470_010 Hb_004032_040--Hb_120470_010 Hb_000117_070 Hb_000117_070 Hb_004032_040--Hb_000117_070 Hb_000574_420 Hb_000574_420 Hb_004032_040--Hb_000574_420 Hb_007054_040 Hb_007054_040 Hb_000169_170--Hb_007054_040 Hb_000009_330 Hb_000009_330 Hb_000169_170--Hb_000009_330 Hb_001541_250 Hb_001541_250 Hb_000169_170--Hb_001541_250 Hb_127599_010 Hb_127599_010 Hb_000169_170--Hb_127599_010 Hb_000862_040 Hb_000862_040 Hb_000169_170--Hb_000862_040 Hb_001862_110 Hb_001862_110 Hb_000169_170--Hb_001862_110 Hb_000958_150 Hb_000958_150 Hb_002284_170--Hb_000958_150 Hb_002092_070 Hb_002092_070 Hb_002284_170--Hb_002092_070 Hb_004429_010 Hb_004429_010 Hb_002284_170--Hb_004429_010 Hb_000949_020 Hb_000949_020 Hb_002284_170--Hb_000949_020 Hb_009252_050 Hb_009252_050 Hb_002284_170--Hb_009252_050 Hb_001033_050 Hb_001033_050 Hb_010712_090--Hb_001033_050 Hb_000236_410 Hb_000236_410 Hb_010712_090--Hb_000236_410 Hb_008253_020 Hb_008253_020 Hb_010712_090--Hb_008253_020 Hb_010712_090--Hb_002284_170 Hb_008103_060 Hb_008103_060 Hb_010712_090--Hb_008103_060 Hb_010712_090--Hb_000862_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.8956 46.5931 16.8388 21.0716 31.0175 17.2246
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.30377 7.5387 14.7021 32.4125 11.7864

CAGE analysis