Hb_178968_080

Information

Type -
Description -
Location Contig178968: 54204-67427
Sequence    

Annotation

kegg
ID rcu:RCOM_1442980
description serine/threonine protein kinase, putative (EC:2.7.11.25)
nr
ID XP_012067444.1
description PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
swissprot
ID Q551H4
description Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum GN=fray2 PE=3 SV=1
trembl
ID A0A067L0G8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26940 PE=4 SV=1
Gene Ontology
ID GO:0005622
description kinase superfamily protein isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178968_080 0.0 - - PREDICTED: serine/threonine-protein kinase OSR1 isoform X2 [Jatropha curcas]
2 Hb_000130_200 0.0978033162 - - PREDICTED: putative serine/threonine-protein kinase isoform X3 [Jatropha curcas]
3 Hb_000032_600 0.0984157513 - - PREDICTED: B2 protein [Jatropha curcas]
4 Hb_000070_110 0.1044155269 - - PREDICTED: uncharacterized protein LOC105645744 isoform X1 [Jatropha curcas]
5 Hb_001040_150 0.1228672691 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000622_060 0.1287131885 - - PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Jatropha curcas]
7 Hb_001054_060 0.1349212627 - - PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Jatropha curcas]
8 Hb_002529_090 0.1456566837 rubber biosynthesis Gene Name: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hevea brasiliensis]
9 Hb_067664_010 0.1476915309 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
10 Hb_033152_110 0.1487527686 transcription factor TF Family: G2-like PREDICTED: probable transcription factor KAN3 [Jatropha curcas]
11 Hb_006185_030 0.1515561455 - - threonine synthase, putative [Ricinus communis]
12 Hb_009803_020 0.1520439267 - - hypothetical protein PRUPE_ppa006317mg [Prunus persica]
13 Hb_000977_150 0.1554727656 - - latex cyanogenic beta glucosidase [Hevea brasiliensis]
14 Hb_002232_160 0.1568766373 - - Transaminase mtnE, putative [Ricinus communis]
15 Hb_001754_120 0.1570160387 - - PREDICTED: probable protein phosphatase 2C 40 [Jatropha curcas]
16 Hb_012851_020 0.1586291999 - - PREDICTED: aminodeoxychorismate synthase, chloroplastic isoform X2 [Jatropha curcas]
17 Hb_000210_080 0.1630220608 - - PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic-like [Jatropha curcas]
18 Hb_007229_050 0.1685838231 - - PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Jatropha curcas]
19 Hb_000768_150 0.1686412679 - - PREDICTED: glycine-rich protein A3-like [Fragaria vesca subsp. vesca]
20 Hb_002486_020 0.1687272149 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_178968_080 Hb_178968_080 Hb_000130_200 Hb_000130_200 Hb_178968_080--Hb_000130_200 Hb_000032_600 Hb_000032_600 Hb_178968_080--Hb_000032_600 Hb_000070_110 Hb_000070_110 Hb_178968_080--Hb_000070_110 Hb_001040_150 Hb_001040_150 Hb_178968_080--Hb_001040_150 Hb_000622_060 Hb_000622_060 Hb_178968_080--Hb_000622_060 Hb_001054_060 Hb_001054_060 Hb_178968_080--Hb_001054_060 Hb_000130_200--Hb_000070_110 Hb_000130_200--Hb_000622_060 Hb_000130_200--Hb_000032_600 Hb_033152_110 Hb_033152_110 Hb_000130_200--Hb_033152_110 Hb_002529_090 Hb_002529_090 Hb_000130_200--Hb_002529_090 Hb_067664_010 Hb_067664_010 Hb_000032_600--Hb_067664_010 Hb_000032_600--Hb_001054_060 Hb_000977_150 Hb_000977_150 Hb_000032_600--Hb_000977_150 Hb_001754_120 Hb_001754_120 Hb_000032_600--Hb_001754_120 Hb_000070_110--Hb_002529_090 Hb_002232_160 Hb_002232_160 Hb_000070_110--Hb_002232_160 Hb_000070_110--Hb_000032_600 Hb_000890_080 Hb_000890_080 Hb_000070_110--Hb_000890_080 Hb_006185_030 Hb_006185_030 Hb_001040_150--Hb_006185_030 Hb_009803_020 Hb_009803_020 Hb_001040_150--Hb_009803_020 Hb_098533_010 Hb_098533_010 Hb_001040_150--Hb_098533_010 Hb_007229_050 Hb_007229_050 Hb_001040_150--Hb_007229_050 Hb_000625_030 Hb_000625_030 Hb_001040_150--Hb_000625_030 Hb_000115_360 Hb_000115_360 Hb_000622_060--Hb_000115_360 Hb_000622_060--Hb_033152_110 Hb_003226_200 Hb_003226_200 Hb_000622_060--Hb_003226_200 Hb_000622_060--Hb_000032_600 Hb_004129_010 Hb_004129_010 Hb_000622_060--Hb_004129_010 Hb_187959_010 Hb_187959_010 Hb_001054_060--Hb_187959_010 Hb_001054_060--Hb_067664_010 Hb_001054_060--Hb_000977_150 Hb_030312_030 Hb_030312_030 Hb_001054_060--Hb_030312_030 Hb_000997_320 Hb_000997_320 Hb_001054_060--Hb_000997_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00925035 0.0812977 0.214719 0.21644 0 0.0135334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0678171 0.0800475 0.0509062 0.307192 0.454118

CAGE analysis