Hb_179511_010

Information

Type -
Description -
Location Contig179511: 1902-3944
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_179511_010 0.0 - - -
2 Hb_003581_110 0.1098378138 - - PREDICTED: uncharacterized protein LOC105649778 isoform X2 [Jatropha curcas]
3 Hb_000392_280 0.1147448977 - - PREDICTED: pectinesterase 3 [Jatropha curcas]
4 Hb_004032_050 0.1176279889 - - hypothetical protein CISIN_1g014592mg [Citrus sinensis]
5 Hb_009801_010 0.1209226026 - - ATPase inhibitor, putative [Ricinus communis]
6 Hb_001754_170 0.1233879431 - - PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog [Jatropha curcas]
7 Hb_000258_130 0.1237825637 - - -
8 Hb_001623_580 0.1243678697 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
9 Hb_004032_060 0.1245471012 - - elongation factor 1 gamma-like protein, partial [Ipomoea nil]
10 Hb_000307_170 0.1268597406 - - PREDICTED: uncharacterized protein LOC105638528 [Jatropha curcas]
11 Hb_002276_190 0.1345075642 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]
12 Hb_010068_030 0.1365910071 - - aconitase, putative [Ricinus communis]
13 Hb_004374_150 0.1376479498 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
14 Hb_003605_070 0.1394700185 - - PREDICTED: angio-associated migratory cell protein [Jatropha curcas]
15 Hb_001016_060 0.1397270496 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001754_240 0.1405264769 - - PREDICTED: mitochondrial thiamine pyrophosphate carrier isoform X1 [Jatropha curcas]
17 Hb_000482_110 0.1409573492 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
18 Hb_007534_040 0.1417521827 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
19 Hb_005015_010 0.143582999 - - PREDICTED: programmed cell death protein 2-like [Jatropha curcas]
20 Hb_000940_040 0.1447793153 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_179511_010 Hb_179511_010 Hb_003581_110 Hb_003581_110 Hb_179511_010--Hb_003581_110 Hb_000392_280 Hb_000392_280 Hb_179511_010--Hb_000392_280 Hb_004032_050 Hb_004032_050 Hb_179511_010--Hb_004032_050 Hb_009801_010 Hb_009801_010 Hb_179511_010--Hb_009801_010 Hb_001754_170 Hb_001754_170 Hb_179511_010--Hb_001754_170 Hb_000258_130 Hb_000258_130 Hb_179511_010--Hb_000258_130 Hb_001016_060 Hb_001016_060 Hb_003581_110--Hb_001016_060 Hb_003581_110--Hb_000392_280 Hb_003581_110--Hb_009801_010 Hb_045502_010 Hb_045502_010 Hb_003581_110--Hb_045502_010 Hb_002405_020 Hb_002405_020 Hb_003581_110--Hb_002405_020 Hb_000363_340 Hb_000363_340 Hb_000392_280--Hb_000363_340 Hb_000173_210 Hb_000173_210 Hb_000392_280--Hb_000173_210 Hb_000300_540 Hb_000300_540 Hb_000392_280--Hb_000300_540 Hb_002025_140 Hb_002025_140 Hb_000392_280--Hb_002025_140 Hb_019871_020 Hb_019871_020 Hb_000392_280--Hb_019871_020 Hb_002276_190 Hb_002276_190 Hb_004032_050--Hb_002276_190 Hb_000307_170 Hb_000307_170 Hb_004032_050--Hb_000307_170 Hb_001623_580 Hb_001623_580 Hb_004032_050--Hb_001623_580 Hb_000175_490 Hb_000175_490 Hb_004032_050--Hb_000175_490 Hb_000768_030 Hb_000768_030 Hb_004032_050--Hb_000768_030 Hb_003605_070 Hb_003605_070 Hb_004032_050--Hb_003605_070 Hb_001956_120 Hb_001956_120 Hb_009801_010--Hb_001956_120 Hb_005015_010 Hb_005015_010 Hb_009801_010--Hb_005015_010 Hb_009801_010--Hb_000392_280 Hb_009801_010--Hb_000307_170 Hb_000976_270 Hb_000976_270 Hb_009801_010--Hb_000976_270 Hb_007534_040 Hb_007534_040 Hb_001754_170--Hb_007534_040 Hb_004374_150 Hb_004374_150 Hb_001754_170--Hb_004374_150 Hb_000236_300 Hb_000236_300 Hb_001754_170--Hb_000236_300 Hb_175612_010 Hb_175612_010 Hb_001754_170--Hb_175612_010 Hb_000107_170 Hb_000107_170 Hb_001754_170--Hb_000107_170 Hb_000617_220 Hb_000617_220 Hb_001754_170--Hb_000617_220 Hb_000922_150 Hb_000922_150 Hb_000258_130--Hb_000922_150 Hb_017438_020 Hb_017438_020 Hb_000258_130--Hb_017438_020 Hb_000940_040 Hb_000940_040 Hb_000258_130--Hb_000940_040 Hb_010068_030 Hb_010068_030 Hb_000258_130--Hb_010068_030 Hb_000422_140 Hb_000422_140 Hb_000258_130--Hb_000422_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.88023 3.89111 3.16373 1.45915 20.1695 10.6896
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.75337 6.70123 1.99859 1.15819 0.554951

CAGE analysis