Hb_179763_010

Information

Type -
Description -
Location Contig179763: 3229-4564
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_179763_010 0.0 - - -
2 Hb_005799_030 0.1376104523 - - PREDICTED: uncharacterized protein LOC103926623 [Pyrus x bretschneideri]
3 Hb_001135_270 0.1425967254 - - -
4 Hb_001899_010 0.1463930108 - - PREDICTED: probable ubiquitin conjugation factor E4 isoform X2 [Jatropha curcas]
5 Hb_003529_210 0.1541330471 - - -
6 Hb_001584_230 0.163161689 - - invertase/pectin methylesterase inhibitor family protein [Populus trichocarpa]
7 Hb_003529_220 0.174645777 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
8 Hb_081636_010 0.1756834994 - - -
9 Hb_066784_020 0.1772140574 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000123_390 0.1788767794 - - conserved hypothetical protein [Ricinus communis]
11 Hb_067345_050 0.1953696974 - - PREDICTED: uncharacterized protein LOC104107076 [Nicotiana tomentosiformis]
12 Hb_002673_050 0.2222984891 - - -
13 Hb_091369_010 0.2223331285 - - -
14 Hb_008473_010 0.2223562278 - - PREDICTED: laccase-14-like [Jatropha curcas]
15 Hb_000944_010 0.2228724958 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
16 Hb_003400_030 0.2228794983 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
17 Hb_009686_010 0.2232474587 - - mitochondrial thioredoxin 2 [Hevea brasiliensis]
18 Hb_002400_450 0.2232645383 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
19 Hb_000260_190 0.2235004167 - - -
20 Hb_034667_010 0.2239597671 - - -

Gene co-expression network

sample Hb_179763_010 Hb_179763_010 Hb_005799_030 Hb_005799_030 Hb_179763_010--Hb_005799_030 Hb_001135_270 Hb_001135_270 Hb_179763_010--Hb_001135_270 Hb_001899_010 Hb_001899_010 Hb_179763_010--Hb_001899_010 Hb_003529_210 Hb_003529_210 Hb_179763_010--Hb_003529_210 Hb_001584_230 Hb_001584_230 Hb_179763_010--Hb_001584_230 Hb_003529_220 Hb_003529_220 Hb_179763_010--Hb_003529_220 Hb_005799_030--Hb_001135_270 Hb_081636_010 Hb_081636_010 Hb_005799_030--Hb_081636_010 Hb_005799_030--Hb_001584_230 Hb_000123_390 Hb_000123_390 Hb_005799_030--Hb_000123_390 Hb_005799_030--Hb_001899_010 Hb_001135_270--Hb_081636_010 Hb_001135_270--Hb_001584_230 Hb_067345_050 Hb_067345_050 Hb_001135_270--Hb_067345_050 Hb_001135_270--Hb_000123_390 Hb_001135_270--Hb_001899_010 Hb_001899_010--Hb_003529_210 Hb_001899_010--Hb_003529_220 Hb_066784_020 Hb_066784_020 Hb_001899_010--Hb_066784_020 Hb_003529_210--Hb_066784_020 Hb_064951_010 Hb_064951_010 Hb_003529_210--Hb_064951_010 Hb_003529_210--Hb_067345_050 Hb_076583_010 Hb_076583_010 Hb_003529_210--Hb_076583_010 Hb_001584_230--Hb_081636_010 Hb_001584_230--Hb_000123_390 Hb_029866_010 Hb_029866_010 Hb_001584_230--Hb_029866_010 Hb_001584_230--Hb_001899_010 Hb_108404_010 Hb_108404_010 Hb_003529_220--Hb_108404_010 Hb_002673_050 Hb_002673_050 Hb_003529_220--Hb_002673_050 Hb_091369_010 Hb_091369_010 Hb_003529_220--Hb_091369_010 Hb_008473_010 Hb_008473_010 Hb_003529_220--Hb_008473_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.261663 0 0 0 1.81746 1.575
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0959856 0 0 0

CAGE analysis