Hb_181191_010

Information

Type -
Description -
Location Contig181191: 13234-14899
Sequence    

Annotation

kegg
ID rcu:RCOM_0231520
description kinase, putative (EC:2.7.11.25)
nr
ID XP_002527233.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SML4
description Kinase, putative OS=Ricinus communis GN=RCOM_0231520 PE=3 SV=1
Gene Ontology
ID GO:0005622
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181191_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_008727_090 0.0243982082 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
3 Hb_000203_120 0.0259687537 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000203_110 0.0326356926 - - -
5 Hb_003747_080 0.0512059842 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
6 Hb_120496_010 0.0900317277 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
7 Hb_000363_100 0.09078825 - - -
8 Hb_001104_290 0.0909634362 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
9 Hb_137821_010 0.0949830537 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
10 Hb_015085_010 0.0972985698 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
11 Hb_011689_090 0.0993629646 - - PREDICTED: uncharacterized protein LOC105631865 [Jatropha curcas]
12 Hb_006275_080 0.0995607959 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
13 Hb_005463_120 0.102325718 - - gibberellin 20-oxidase, putative [Ricinus communis]
14 Hb_000917_220 0.1067067355 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
15 Hb_018671_010 0.1078612313 - - -
16 Hb_000527_090 0.1079466509 - - serine carboxypeptidase, putative [Ricinus communis]
17 Hb_170597_010 0.1084557882 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
18 Hb_006052_080 0.1095049054 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH140-like [Populus euphratica]
19 Hb_002186_120 0.110209543 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
20 Hb_006452_080 0.1103740782 - - Nodulin, putative [Ricinus communis]

Gene co-expression network

sample Hb_181191_010 Hb_181191_010 Hb_008727_090 Hb_008727_090 Hb_181191_010--Hb_008727_090 Hb_000203_120 Hb_000203_120 Hb_181191_010--Hb_000203_120 Hb_000203_110 Hb_000203_110 Hb_181191_010--Hb_000203_110 Hb_003747_080 Hb_003747_080 Hb_181191_010--Hb_003747_080 Hb_120496_010 Hb_120496_010 Hb_181191_010--Hb_120496_010 Hb_000363_100 Hb_000363_100 Hb_181191_010--Hb_000363_100 Hb_008727_090--Hb_000203_120 Hb_008727_090--Hb_000203_110 Hb_008727_090--Hb_003747_080 Hb_000917_220 Hb_000917_220 Hb_008727_090--Hb_000917_220 Hb_018671_010 Hb_018671_010 Hb_008727_090--Hb_018671_010 Hb_000203_120--Hb_000203_110 Hb_000203_120--Hb_003747_080 Hb_000203_120--Hb_000917_220 Hb_000203_120--Hb_018671_010 Hb_000203_110--Hb_003747_080 Hb_000203_110--Hb_120496_010 Hb_137821_010 Hb_137821_010 Hb_000203_110--Hb_137821_010 Hb_003747_080--Hb_137821_010 Hb_003747_080--Hb_120496_010 Hb_000527_090 Hb_000527_090 Hb_003747_080--Hb_000527_090 Hb_001277_390 Hb_001277_390 Hb_120496_010--Hb_001277_390 Hb_118941_010 Hb_118941_010 Hb_120496_010--Hb_118941_010 Hb_000224_070 Hb_000224_070 Hb_120496_010--Hb_000224_070 Hb_007441_320 Hb_007441_320 Hb_120496_010--Hb_007441_320 Hb_001104_290 Hb_001104_290 Hb_000363_100--Hb_001104_290 Hb_002874_100 Hb_002874_100 Hb_000363_100--Hb_002874_100 Hb_003252_030 Hb_003252_030 Hb_000363_100--Hb_003252_030 Hb_011689_090 Hb_011689_090 Hb_000363_100--Hb_011689_090 Hb_000445_480 Hb_000445_480 Hb_000363_100--Hb_000445_480 Hb_116679_010 Hb_116679_010 Hb_000363_100--Hb_116679_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.089818 0.0559887 1.20893 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis