Hb_181744_010

Information

Type -
Description -
Location Contig181744: 3-1232
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID Q8GUQ5
description Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at4g36180

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181744_010 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_000340_550 0.0600416512 - - PREDICTED: rho GTPase-activating protein 2 [Jatropha curcas]
3 Hb_001279_110 0.0627540351 - - PREDICTED: uncharacterized protein LOC105633338 isoform X4 [Jatropha curcas]
4 Hb_005116_120 0.0692114524 - - PREDICTED: uncharacterized protein LOC105649997 isoform X2 [Jatropha curcas]
5 Hb_003777_260 0.0693766346 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]
6 Hb_000060_030 0.072637907 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Jatropha curcas]
7 Hb_000038_070 0.0741896313 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001439_240 0.0742014812 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
9 Hb_000116_050 0.0751018173 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
10 Hb_000085_360 0.076723807 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
11 Hb_001998_180 0.0785463958 - - actin binding protein, putative [Ricinus communis]
12 Hb_011849_010 0.078648687 - - PREDICTED: kinesin-like protein KIFC3 isoform X4 [Jatropha curcas]
13 Hb_005288_090 0.0832222809 - - PREDICTED: uncharacterized protein LOC105647753 [Jatropha curcas]
14 Hb_012395_040 0.084234477 - - conserved hypothetical protein [Ricinus communis]
15 Hb_119044_040 0.0884566312 - - cyclin B, putative [Ricinus communis]
16 Hb_002053_100 0.0886476052 - - actin binding protein, putative [Ricinus communis]
17 Hb_001541_140 0.0894039512 - - PREDICTED: probable protein phosphatase 2C 14 [Jatropha curcas]
18 Hb_009113_060 0.0897404585 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000830_010 0.0916142987 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005618_070 0.0919677844 - - PREDICTED: uncharacterized protein LOC105643318 [Jatropha curcas]

Gene co-expression network

sample Hb_181744_010 Hb_181744_010 Hb_000340_550 Hb_000340_550 Hb_181744_010--Hb_000340_550 Hb_001279_110 Hb_001279_110 Hb_181744_010--Hb_001279_110 Hb_005116_120 Hb_005116_120 Hb_181744_010--Hb_005116_120 Hb_003777_260 Hb_003777_260 Hb_181744_010--Hb_003777_260 Hb_000060_030 Hb_000060_030 Hb_181744_010--Hb_000060_030 Hb_000038_070 Hb_000038_070 Hb_181744_010--Hb_000038_070 Hb_000340_550--Hb_003777_260 Hb_001439_240 Hb_001439_240 Hb_000340_550--Hb_001439_240 Hb_005288_090 Hb_005288_090 Hb_000340_550--Hb_005288_090 Hb_002053_100 Hb_002053_100 Hb_000340_550--Hb_002053_100 Hb_000340_550--Hb_005116_120 Hb_001279_110--Hb_000060_030 Hb_000116_050 Hb_000116_050 Hb_001279_110--Hb_000116_050 Hb_119044_040 Hb_119044_040 Hb_001279_110--Hb_119044_040 Hb_012395_040 Hb_012395_040 Hb_001279_110--Hb_012395_040 Hb_003776_050 Hb_003776_050 Hb_001279_110--Hb_003776_050 Hb_002928_150 Hb_002928_150 Hb_001279_110--Hb_002928_150 Hb_005116_120--Hb_003777_260 Hb_005116_120--Hb_005288_090 Hb_001998_180 Hb_001998_180 Hb_005116_120--Hb_001998_180 Hb_005116_120--Hb_001279_110 Hb_002243_030 Hb_002243_030 Hb_003777_260--Hb_002243_030 Hb_003777_260--Hb_001439_240 Hb_003777_260--Hb_005288_090 Hb_000060_030--Hb_000116_050 Hb_000060_030--Hb_001998_180 Hb_000060_030--Hb_003776_050 Hb_000060_030--Hb_002928_150 Hb_000060_030--Hb_012395_040 Hb_011849_010 Hb_011849_010 Hb_000038_070--Hb_011849_010 Hb_000085_360 Hb_000085_360 Hb_000038_070--Hb_000085_360 Hb_000856_390 Hb_000856_390 Hb_000038_070--Hb_000856_390 Hb_002374_090 Hb_002374_090 Hb_000038_070--Hb_002374_090 Hb_003106_090 Hb_003106_090 Hb_000038_070--Hb_003106_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0601997 2.42074 1.05934 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.235742 0.256866

CAGE analysis