Hb_181838_010

Information

Type -
Description -
Location Contig181838: 2936-4233
Sequence    

Annotation

kegg
ID rcu:RCOM_0621440
description aldolase, putative (EC:4.1.2.14)
nr
ID XP_012068735.1
description PREDICTED: uncharacterized protein LOC105631275 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L007
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24577 PE=4 SV=1
Gene Ontology
ID GO:0003824
description khg kdpg aldolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17704: 3012-3954
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_181838_010 0.0 - - PREDICTED: uncharacterized protein LOC105631275 [Jatropha curcas]
2 Hb_000350_030 0.1332736829 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00277 [Jatropha curcas]
3 Hb_001163_020 0.1338439212 desease resistance Gene Name: ABC_trans_N ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_001348_090 0.1464578592 - - PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Jatropha curcas]
5 Hb_001221_200 0.1568851352 - - -
6 Hb_004242_170 0.1653958528 - - calcium/calmodulin-regulated receptor-like kinase [Manihot esculenta]
7 Hb_001793_050 0.1656290322 - - PREDICTED: uncharacterized protein LOC105632663 [Jatropha curcas]
8 Hb_000951_120 0.1672286499 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105636019 [Jatropha curcas]
9 Hb_000108_150 0.1679040344 - - alpha/beta hydrolase, putative [Ricinus communis]
10 Hb_000347_190 0.1738158399 - - PREDICTED: transmembrane protein 87A [Jatropha curcas]
11 Hb_002005_040 0.1744997001 - - PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [Jatropha curcas]
12 Hb_024677_010 0.174908703 - - superoxide dismutase [fe], putative [Ricinus communis]
13 Hb_000336_200 0.1752549045 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
14 Hb_000045_050 0.1765871862 - - PREDICTED: probable zinc metalloprotease EGY2, chloroplastic [Jatropha curcas]
15 Hb_002374_450 0.1767095502 - - PREDICTED: chlorophyllide a oxygenase, chloroplastic [Jatropha curcas]
16 Hb_000665_270 0.1775729838 - - PREDICTED: adenine phosphoribosyltransferase 5 [Jatropha curcas]
17 Hb_004055_160 0.1786152313 - - PREDICTED: glyoxylate/succinic semialdehyde reductase 2, chloroplastic [Jatropha curcas]
18 Hb_001728_110 0.1789297644 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF039-like [Jatropha curcas]
19 Hb_031139_010 0.1794873638 - - PREDICTED: uncharacterized protein LOC105632403 isoform X1 [Jatropha curcas]
20 Hb_000061_250 0.1796547747 - - hypothetical protein JCGZ_11665 [Jatropha curcas]

Gene co-expression network

sample Hb_181838_010 Hb_181838_010 Hb_000350_030 Hb_000350_030 Hb_181838_010--Hb_000350_030 Hb_001163_020 Hb_001163_020 Hb_181838_010--Hb_001163_020 Hb_001348_090 Hb_001348_090 Hb_181838_010--Hb_001348_090 Hb_001221_200 Hb_001221_200 Hb_181838_010--Hb_001221_200 Hb_004242_170 Hb_004242_170 Hb_181838_010--Hb_004242_170 Hb_001793_050 Hb_001793_050 Hb_181838_010--Hb_001793_050 Hb_000347_190 Hb_000347_190 Hb_000350_030--Hb_000347_190 Hb_001677_040 Hb_001677_040 Hb_000350_030--Hb_001677_040 Hb_032631_020 Hb_032631_020 Hb_000350_030--Hb_032631_020 Hb_000056_110 Hb_000056_110 Hb_000350_030--Hb_000056_110 Hb_105033_010 Hb_105033_010 Hb_000350_030--Hb_105033_010 Hb_001163_020--Hb_000350_030 Hb_000336_200 Hb_000336_200 Hb_001163_020--Hb_000336_200 Hb_001163_020--Hb_001793_050 Hb_003207_030 Hb_003207_030 Hb_001163_020--Hb_003207_030 Hb_012799_190 Hb_012799_190 Hb_001163_020--Hb_012799_190 Hb_002005_040 Hb_002005_040 Hb_001348_090--Hb_002005_040 Hb_002374_450 Hb_002374_450 Hb_001348_090--Hb_002374_450 Hb_004055_160 Hb_004055_160 Hb_001348_090--Hb_004055_160 Hb_001348_090--Hb_004242_170 Hb_024677_010 Hb_024677_010 Hb_001348_090--Hb_024677_010 Hb_000441_050 Hb_000441_050 Hb_001348_090--Hb_000441_050 Hb_000866_340 Hb_000866_340 Hb_001221_200--Hb_000866_340 Hb_001221_190 Hb_001221_190 Hb_001221_200--Hb_001221_190 Hb_000977_290 Hb_000977_290 Hb_001221_200--Hb_000977_290 Hb_000261_400 Hb_000261_400 Hb_001221_200--Hb_000261_400 Hb_005063_080 Hb_005063_080 Hb_001221_200--Hb_005063_080 Hb_004242_170--Hb_000441_050 Hb_001053_020 Hb_001053_020 Hb_004242_170--Hb_001053_020 Hb_000108_150 Hb_000108_150 Hb_004242_170--Hb_000108_150 Hb_005977_060 Hb_005977_060 Hb_004242_170--Hb_005977_060 Hb_009692_040 Hb_009692_040 Hb_004242_170--Hb_009692_040 Hb_000665_270 Hb_000665_270 Hb_001793_050--Hb_000665_270 Hb_071079_020 Hb_071079_020 Hb_001793_050--Hb_071079_020 Hb_001793_050--Hb_000336_200 Hb_001793_050--Hb_005063_080 Hb_002811_050 Hb_002811_050 Hb_001793_050--Hb_002811_050 Hb_001269_500 Hb_001269_500 Hb_001793_050--Hb_001269_500
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.334011 0.612728 3.46811 3.24534 0.260798 1.66478
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.450167 0.495385 0 0.664633 6.23601

CAGE analysis