Hb_182021_010

Information

Type -
Description -
Location Contig182021: 466-783
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa004620mg
description hypothetical protein
nr
ID ABK60191.1
description sucrose transporter 4 [Hevea brasiliensis]
swissprot
ID Q9FE59
description Sucrose transport protein SUC4 OS=Arabidopsis thaliana GN=SUC4 PE=1 SV=2
trembl
ID A0T060
description Sucrose transporter 4 OS=Hevea brasiliensis GN=SUT4 PE=2 SV=1
Gene Ontology
ID GO:0016021
description sucrose transport protein suc4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182021_010 0.0 - - sucrose transporter 4 [Hevea brasiliensis]
2 Hb_000740_130 0.09211428 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
3 Hb_000844_100 0.1103720992 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
4 Hb_009785_010 0.1115707352 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
5 Hb_088916_010 0.1125178912 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
6 Hb_002551_090 0.1133608371 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
7 Hb_012807_060 0.1163471661 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_004884_200 0.1214179595 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
9 Hb_002391_350 0.1230391355 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
10 Hb_132515_010 0.1259889246 - - phosphoprotein phosphatase, putative [Ricinus communis]
11 Hb_007123_020 0.1260230004 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
12 Hb_008140_060 0.1261906243 - - Cytochrome P450, putative [Theobroma cacao]
13 Hb_014037_010 0.1261985775 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]
14 Hb_006120_030 0.1276984891 - - -
15 Hb_009642_010 0.1317243034 - - Disease resistance protein RFL1, putative [Ricinus communis]
16 Hb_005237_040 0.1318602404 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
17 Hb_002173_060 0.1320750371 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
18 Hb_001158_080 0.1329993825 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
19 Hb_000934_290 0.1362263805 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000579_180 0.1374892692 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_182021_010 Hb_182021_010 Hb_000740_130 Hb_000740_130 Hb_182021_010--Hb_000740_130 Hb_000844_100 Hb_000844_100 Hb_182021_010--Hb_000844_100 Hb_009785_010 Hb_009785_010 Hb_182021_010--Hb_009785_010 Hb_088916_010 Hb_088916_010 Hb_182021_010--Hb_088916_010 Hb_002551_090 Hb_002551_090 Hb_182021_010--Hb_002551_090 Hb_012807_060 Hb_012807_060 Hb_182021_010--Hb_012807_060 Hb_000740_130--Hb_000844_100 Hb_000740_130--Hb_088916_010 Hb_132515_010 Hb_132515_010 Hb_000740_130--Hb_132515_010 Hb_054865_030 Hb_054865_030 Hb_000740_130--Hb_054865_030 Hb_008692_010 Hb_008692_010 Hb_000740_130--Hb_008692_010 Hb_008140_060 Hb_008140_060 Hb_000844_100--Hb_008140_060 Hb_001158_080 Hb_001158_080 Hb_000844_100--Hb_001158_080 Hb_002173_060 Hb_002173_060 Hb_000844_100--Hb_002173_060 Hb_094637_010 Hb_094637_010 Hb_000844_100--Hb_094637_010 Hb_005237_040 Hb_005237_040 Hb_009785_010--Hb_005237_040 Hb_004884_200 Hb_004884_200 Hb_009785_010--Hb_004884_200 Hb_014037_010 Hb_014037_010 Hb_009785_010--Hb_014037_010 Hb_006711_020 Hb_006711_020 Hb_009785_010--Hb_006711_020 Hb_000236_050 Hb_000236_050 Hb_009785_010--Hb_000236_050 Hb_002391_350 Hb_002391_350 Hb_009785_010--Hb_002391_350 Hb_001838_050 Hb_001838_050 Hb_088916_010--Hb_001838_050 Hb_088916_010--Hb_008140_060 Hb_000920_360 Hb_000920_360 Hb_088916_010--Hb_000920_360 Hb_001105_200 Hb_001105_200 Hb_088916_010--Hb_001105_200 Hb_002551_090--Hb_012807_060 Hb_002551_090--Hb_001158_080 Hb_000934_290 Hb_000934_290 Hb_002551_090--Hb_000934_290 Hb_002551_090--Hb_008140_060 Hb_003052_120 Hb_003052_120 Hb_002551_090--Hb_003052_120 Hb_022501_020 Hb_022501_020 Hb_002551_090--Hb_022501_020 Hb_009581_050 Hb_009581_050 Hb_012807_060--Hb_009581_050 Hb_012807_060--Hb_003052_120 Hb_000579_180 Hb_000579_180 Hb_012807_060--Hb_000579_180 Hb_003430_020 Hb_003430_020 Hb_012807_060--Hb_003430_020 Hb_008226_120 Hb_008226_120 Hb_012807_060--Hb_008226_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 65.3134 8.143 31.4424 0.52615 0.748014
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.324615 0.255403 1.49569 110.407 27.6922

CAGE analysis