Hb_182167_010

Information

Type -
Description -
Location Contig182167: 2-388
Sequence    

Annotation

kegg
ID pvu:PHAVU_001G0486001
description hypothetical protein
nr
ID XP_007161173.1
description hypothetical protein PHAVU_001G0486001g, partial [Phaseolus vulgaris]
swissprot
ID -
description -
trembl
ID V7CUX7
description Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_001G0486001g PE=4 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182167_010 0.0 - - hypothetical protein PHAVU_001G0486001g, partial [Phaseolus vulgaris]
2 Hb_005381_010 0.0795101025 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH35 isoform X1 [Jatropha curcas]
3 Hb_012496_020 0.1050956478 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_003060_150 0.1053403674 - - UDP-glucosyltransferase, putative [Ricinus communis]
5 Hb_000069_530 0.1074870816 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
6 Hb_121540_010 0.1162810824 - - PREDICTED: UDP-glycosyltransferase 88A1-like [Jatropha curcas]
7 Hb_001153_250 0.122851206 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1A-like [Jatropha curcas]
8 Hb_186995_010 0.1241428443 - - hypothetical protein POPTR_0012s01755g [Populus trichocarpa]
9 Hb_000172_410 0.1276629477 - - metal ion binding protein, putative [Ricinus communis]
10 Hb_004612_020 0.1288052585 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
11 Hb_002066_050 0.1313362562 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
12 Hb_001660_080 0.1327481129 - - hypothetical protein JCGZ_14829 [Jatropha curcas]
13 Hb_001369_670 0.1357314307 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
14 Hb_000627_130 0.1372601943 - - Polcalcin Jun o, putative [Ricinus communis]
15 Hb_000665_090 0.1404731763 - - conserved hypothetical protein [Ricinus communis]
16 Hb_009252_090 0.1408783448 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
17 Hb_002301_340 0.1421535921 transcription factor TF Family: B3 leafy cotyledon 2 [Ricinus communis]
18 Hb_029664_010 0.1436900368 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_007546_010 0.1465308058 - - unnamed protein product [Vitis vinifera]
20 Hb_002133_010 0.1465469916 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]

Gene co-expression network

sample Hb_182167_010 Hb_182167_010 Hb_005381_010 Hb_005381_010 Hb_182167_010--Hb_005381_010 Hb_012496_020 Hb_012496_020 Hb_182167_010--Hb_012496_020 Hb_003060_150 Hb_003060_150 Hb_182167_010--Hb_003060_150 Hb_000069_530 Hb_000069_530 Hb_182167_010--Hb_000069_530 Hb_121540_010 Hb_121540_010 Hb_182167_010--Hb_121540_010 Hb_001153_250 Hb_001153_250 Hb_182167_010--Hb_001153_250 Hb_005381_010--Hb_000069_530 Hb_005381_010--Hb_121540_010 Hb_005381_010--Hb_003060_150 Hb_001660_080 Hb_001660_080 Hb_005381_010--Hb_001660_080 Hb_077694_010 Hb_077694_010 Hb_005381_010--Hb_077694_010 Hb_186995_010 Hb_186995_010 Hb_012496_020--Hb_186995_010 Hb_167206_010 Hb_167206_010 Hb_012496_020--Hb_167206_010 Hb_000438_200 Hb_000438_200 Hb_012496_020--Hb_000438_200 Hb_115962_010 Hb_115962_010 Hb_012496_020--Hb_115962_010 Hb_012496_020--Hb_005381_010 Hb_003060_150--Hb_000069_530 Hb_003060_150--Hb_121540_010 Hb_028486_010 Hb_028486_010 Hb_003060_150--Hb_028486_010 Hb_003060_150--Hb_001660_080 Hb_009252_090 Hb_009252_090 Hb_003060_150--Hb_009252_090 Hb_000069_530--Hb_121540_010 Hb_000069_530--Hb_077694_010 Hb_000592_070 Hb_000592_070 Hb_000069_530--Hb_000592_070 Hb_000069_530--Hb_001660_080 Hb_121540_010--Hb_028486_010 Hb_121540_010--Hb_077694_010 Hb_121540_010--Hb_001660_080 Hb_029664_010 Hb_029664_010 Hb_001153_250--Hb_029664_010 Hb_000627_130 Hb_000627_130 Hb_001153_250--Hb_000627_130 Hb_006615_060 Hb_006615_060 Hb_001153_250--Hb_006615_060 Hb_000959_240 Hb_000959_240 Hb_001153_250--Hb_000959_240 Hb_007858_020 Hb_007858_020 Hb_001153_250--Hb_007858_020 Hb_003207_230 Hb_003207_230 Hb_001153_250--Hb_003207_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.268498 15.2364 16.7844 6.81855 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.03019

CAGE analysis