Hb_182516_010

Information

Type -
Description -
Location Contig182516: 419-2428
Sequence    

Annotation

kegg
ID rcu:RCOM_1685860
description protein binding protein, putative
nr
ID XP_012081571.1
description PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K142
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18422 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182516_010 0.0 - - PREDICTED: uncharacterized protein LOC105641595 [Jatropha curcas]
2 Hb_000365_090 0.1375888053 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_004375_130 0.1453941326 - - kinesin heavy chain, putative [Ricinus communis]
4 Hb_000137_070 0.1638788911 - - PREDICTED: uncharacterized protein LOC105644263 isoform X1 [Jatropha curcas]
5 Hb_001141_410 0.1665117162 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
6 Hb_113739_010 0.1811596768 - - hypothetical protein JCGZ_06379 [Jatropha curcas]
7 Hb_007722_010 0.193687831 - - PREDICTED: kinesin light chain [Jatropha curcas]
8 Hb_000554_010 0.1945735594 - - transporter, putative [Ricinus communis]
9 Hb_000544_180 0.1948719487 - - PREDICTED: probable auxin efflux carrier component 1c isoform X1 [Jatropha curcas]
10 Hb_004846_200 0.1976612788 - - PREDICTED: shikimate O-hydroxycinnamoyltransferase [Jatropha curcas]
11 Hb_002769_020 0.2047204044 - - DNA-damage-inducible protein f, putative [Ricinus communis]
12 Hb_004705_040 0.2127129738 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
13 Hb_045770_010 0.2146462066 - - ER lumen protein retaining receptor [Populus trichocarpa]
14 Hb_074449_010 0.215667237 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
15 Hb_026447_030 0.220073928 - - hypothetical protein POPTR_0006s06500g [Populus trichocarpa]
16 Hb_001488_340 0.2236480532 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
17 Hb_000016_030 0.2240195813 - - PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Jatropha curcas]
18 Hb_150023_010 0.2240620488 - - 50S ribosomal protein L2, putative [Ricinus communis]
19 Hb_003669_010 0.2278367318 - - PREDICTED: psbP domain-containing protein 5, chloroplastic [Populus euphratica]
20 Hb_004007_160 0.2295637699 - - PREDICTED: formin-like protein 6 [Jatropha curcas]

Gene co-expression network

sample Hb_182516_010 Hb_182516_010 Hb_000365_090 Hb_000365_090 Hb_182516_010--Hb_000365_090 Hb_004375_130 Hb_004375_130 Hb_182516_010--Hb_004375_130 Hb_000137_070 Hb_000137_070 Hb_182516_010--Hb_000137_070 Hb_001141_410 Hb_001141_410 Hb_182516_010--Hb_001141_410 Hb_113739_010 Hb_113739_010 Hb_182516_010--Hb_113739_010 Hb_007722_010 Hb_007722_010 Hb_182516_010--Hb_007722_010 Hb_026447_030 Hb_026447_030 Hb_000365_090--Hb_026447_030 Hb_000365_090--Hb_004375_130 Hb_000365_090--Hb_007722_010 Hb_002027_220 Hb_002027_220 Hb_000365_090--Hb_002027_220 Hb_001268_210 Hb_001268_210 Hb_000365_090--Hb_001268_210 Hb_000554_010 Hb_000554_010 Hb_004375_130--Hb_000554_010 Hb_003376_050 Hb_003376_050 Hb_004375_130--Hb_003376_050 Hb_002769_020 Hb_002769_020 Hb_004375_130--Hb_002769_020 Hb_000096_080 Hb_000096_080 Hb_004375_130--Hb_000096_080 Hb_000392_370 Hb_000392_370 Hb_004375_130--Hb_000392_370 Hb_004705_040 Hb_004705_040 Hb_004375_130--Hb_004705_040 Hb_000137_070--Hb_113739_010 Hb_150023_010 Hb_150023_010 Hb_000137_070--Hb_150023_010 Hb_007479_050 Hb_007479_050 Hb_000137_070--Hb_007479_050 Hb_000445_170 Hb_000445_170 Hb_000137_070--Hb_000445_170 Hb_003669_010 Hb_003669_010 Hb_000137_070--Hb_003669_010 Hb_001141_410--Hb_002769_020 Hb_000203_230 Hb_000203_230 Hb_001141_410--Hb_000203_230 Hb_001141_410--Hb_004375_130 Hb_001488_340 Hb_001488_340 Hb_001141_410--Hb_001488_340 Hb_000700_150 Hb_000700_150 Hb_001141_410--Hb_000700_150 Hb_074449_010 Hb_074449_010 Hb_001141_410--Hb_074449_010 Hb_000390_200 Hb_000390_200 Hb_113739_010--Hb_000390_200 Hb_068804_150 Hb_068804_150 Hb_113739_010--Hb_068804_150 Hb_000139_330 Hb_000139_330 Hb_113739_010--Hb_000139_330 Hb_002603_130 Hb_002603_130 Hb_113739_010--Hb_002603_130 Hb_007722_010--Hb_004375_130 Hb_007722_010--Hb_000554_010 Hb_004007_160 Hb_004007_160 Hb_007722_010--Hb_004007_160 Hb_095595_010 Hb_095595_010 Hb_007722_010--Hb_095595_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0267 1.41859 7.79103 24.5208 12.4829 17.7126
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.6102 3.03417 1.79132 1.09527 9.82654

CAGE analysis