Hb_182680_010

Information

Type -
Description -
Location Contig182680: 760-1245
Sequence    

Annotation

kegg
ID rcu:RCOM_1292200
description Disease resistance protein RGA2, putative (EC:3.1.3.16)
nr
ID KDP37632.1
description hypothetical protein JCGZ_07831 [Jatropha curcas]
swissprot
ID Q7XA39
description Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
trembl
ID A0A067KNB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07831 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_182680_010 0.0 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
2 Hb_004143_120 0.1722922876 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
3 Hb_000343_100 0.1951137958 - - PREDICTED: regulator of telomere elongation helicase 1 homolog [Jatropha curcas]
4 Hb_007943_160 0.2029183139 - - PREDICTED: aspartate aminotransferase, cytoplasmic [Jatropha curcas]
5 Hb_000209_110 0.2213338334 - - PREDICTED: receptor-like protein kinase BRI1-like 3 [Jatropha curcas]
6 Hb_009467_040 0.2262954383 - - PREDICTED: putative B3 domain-containing protein At3g24850 [Jatropha curcas]
7 Hb_003428_100 0.2280248369 - - Polygalacturonase precursor, putative [Ricinus communis]
8 Hb_004129_050 0.2310712508 - - PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Jatropha curcas]
9 Hb_022819_010 0.235298652 - - Disease resistance protein RPS5, putative [Ricinus communis]
10 Hb_000544_100 0.2384088659 - - hypothetical protein JCGZ_03636 [Jatropha curcas]
11 Hb_000181_020 0.2401275837 - - PREDICTED: D-amino-acid transaminase, chloroplastic-like [Jatropha curcas]
12 Hb_000735_170 0.2404299084 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
13 Hb_003813_120 0.2419896843 - - zinc finger protein, putative [Ricinus communis]
14 Hb_096811_010 0.242597319 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At1g61190 [Vitis vinifera]
15 Hb_000041_060 0.2450194642 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
16 Hb_000093_150 0.2545674423 - - 6-phosphogluconolactonase, putative [Ricinus communis]
17 Hb_002477_220 0.2552079327 - - hypothetical protein POPTR_0017s06650g [Populus trichocarpa]
18 Hb_000347_110 0.2575778861 - - BnaA05g25330D [Brassica napus]
19 Hb_011360_060 0.2575790179 - - glycogen phosphorylase, putative [Ricinus communis]
20 Hb_000230_230 0.2579825101 - - hydrolase, putative [Ricinus communis]

Gene co-expression network

sample Hb_182680_010 Hb_182680_010 Hb_004143_120 Hb_004143_120 Hb_182680_010--Hb_004143_120 Hb_000343_100 Hb_000343_100 Hb_182680_010--Hb_000343_100 Hb_007943_160 Hb_007943_160 Hb_182680_010--Hb_007943_160 Hb_000209_110 Hb_000209_110 Hb_182680_010--Hb_000209_110 Hb_009467_040 Hb_009467_040 Hb_182680_010--Hb_009467_040 Hb_003428_100 Hb_003428_100 Hb_182680_010--Hb_003428_100 Hb_004143_120--Hb_000343_100 Hb_004143_120--Hb_003428_100 Hb_005389_190 Hb_005389_190 Hb_004143_120--Hb_005389_190 Hb_002233_040 Hb_002233_040 Hb_004143_120--Hb_002233_040 Hb_000181_020 Hb_000181_020 Hb_004143_120--Hb_000181_020 Hb_003813_120 Hb_003813_120 Hb_000343_100--Hb_003813_120 Hb_000384_050 Hb_000384_050 Hb_000343_100--Hb_000384_050 Hb_000343_100--Hb_000181_020 Hb_000347_110 Hb_000347_110 Hb_000343_100--Hb_000347_110 Hb_000098_310 Hb_000098_310 Hb_000343_100--Hb_000098_310 Hb_003226_120 Hb_003226_120 Hb_007943_160--Hb_003226_120 Hb_000011_290 Hb_000011_290 Hb_007943_160--Hb_000011_290 Hb_012545_090 Hb_012545_090 Hb_007943_160--Hb_012545_090 Hb_006275_010 Hb_006275_010 Hb_007943_160--Hb_006275_010 Hb_004079_080 Hb_004079_080 Hb_007943_160--Hb_004079_080 Hb_039145_010 Hb_039145_010 Hb_007943_160--Hb_039145_010 Hb_000544_100 Hb_000544_100 Hb_000209_110--Hb_000544_100 Hb_003073_180 Hb_003073_180 Hb_000209_110--Hb_003073_180 Hb_006586_030 Hb_006586_030 Hb_000209_110--Hb_006586_030 Hb_000093_150 Hb_000093_150 Hb_000209_110--Hb_000093_150 Hb_004462_010 Hb_004462_010 Hb_000209_110--Hb_004462_010 Hb_002407_080 Hb_002407_080 Hb_000209_110--Hb_002407_080 Hb_000135_070 Hb_000135_070 Hb_009467_040--Hb_000135_070 Hb_001558_030 Hb_001558_030 Hb_009467_040--Hb_001558_030 Hb_009467_040--Hb_000181_020 Hb_001500_070 Hb_001500_070 Hb_009467_040--Hb_001500_070 Hb_004129_050 Hb_004129_050 Hb_009467_040--Hb_004129_050 Hb_000204_030 Hb_000204_030 Hb_003428_100--Hb_000204_030 Hb_029510_110 Hb_029510_110 Hb_003428_100--Hb_029510_110 Hb_001104_200 Hb_001104_200 Hb_003428_100--Hb_001104_200 Hb_002046_100 Hb_002046_100 Hb_003428_100--Hb_002046_100 Hb_002325_020 Hb_002325_020 Hb_003428_100--Hb_002325_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.770954 1.9733 1.56189 3.49552 1.6378 6.22661
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.11018 0.77359 0.930513 29.7607 4.10525

CAGE analysis