Hb_183209_020

Information

Type -
Description -
Location Contig183209: 5942-8260
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa000976mg
description hypothetical protein
nr
ID XP_012089396.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A0B0PP12
description Uncharacterized protein OS=Gossypium arboreum GN=F383_03586 PE=4 SV=1
Gene Ontology
ID GO:0016301
description probable leucine-rich repeat receptor-like protein kinase at5g63930

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183209_020 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
2 Hb_050898_010 0.093455872 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
3 Hb_103541_010 0.1012716699 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
4 Hb_189034_010 0.1144974149 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_000002_230 0.1152985364 - - RING/U-box superfamily protein [Theobroma cacao]
6 Hb_000137_030 0.1167851739 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
7 Hb_000203_150 0.1196653443 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
8 Hb_015884_010 0.1240426438 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X1 [Jatropha curcas]
9 Hb_000111_190 0.1262193283 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
10 Hb_000032_340 0.1263069006 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
11 Hb_002431_090 0.1284733263 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002477_080 0.1291619938 - - hypothetical protein RCOM_0653450 [Ricinus communis]
13 Hb_005892_010 0.1301653144 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
14 Hb_000090_020 0.130240359 - - acyltransferase, putative [Ricinus communis]
15 Hb_012553_030 0.1303513718 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
16 Hb_002325_050 0.1315550324 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
17 Hb_010417_090 0.1413195589 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
18 Hb_001823_070 0.1464957456 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
19 Hb_002236_010 0.1466678913 - - PREDICTED: bidirectional sugar transporter SWEET4 [Jatropha curcas]
20 Hb_006153_130 0.1467838275 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_183209_020 Hb_183209_020 Hb_050898_010 Hb_050898_010 Hb_183209_020--Hb_050898_010 Hb_103541_010 Hb_103541_010 Hb_183209_020--Hb_103541_010 Hb_189034_010 Hb_189034_010 Hb_183209_020--Hb_189034_010 Hb_000002_230 Hb_000002_230 Hb_183209_020--Hb_000002_230 Hb_000137_030 Hb_000137_030 Hb_183209_020--Hb_000137_030 Hb_000203_150 Hb_000203_150 Hb_183209_020--Hb_000203_150 Hb_005892_010 Hb_005892_010 Hb_050898_010--Hb_005892_010 Hb_000922_290 Hb_000922_290 Hb_050898_010--Hb_000922_290 Hb_050898_010--Hb_000137_030 Hb_050898_010--Hb_103541_010 Hb_000816_050 Hb_000816_050 Hb_050898_010--Hb_000816_050 Hb_000090_020 Hb_000090_020 Hb_103541_010--Hb_000090_020 Hb_012553_030 Hb_012553_030 Hb_103541_010--Hb_012553_030 Hb_000537_090 Hb_000537_090 Hb_103541_010--Hb_000537_090 Hb_002598_020 Hb_002598_020 Hb_103541_010--Hb_002598_020 Hb_189034_010--Hb_000137_030 Hb_002431_090 Hb_002431_090 Hb_189034_010--Hb_002431_090 Hb_002325_050 Hb_002325_050 Hb_189034_010--Hb_002325_050 Hb_005784_020 Hb_005784_020 Hb_189034_010--Hb_005784_020 Hb_189034_010--Hb_050898_010 Hb_000002_230--Hb_000203_150 Hb_002894_040 Hb_002894_040 Hb_000002_230--Hb_002894_040 Hb_179118_010 Hb_179118_010 Hb_000002_230--Hb_179118_010 Hb_004590_010 Hb_004590_010 Hb_000002_230--Hb_004590_010 Hb_183820_010 Hb_183820_010 Hb_000002_230--Hb_183820_010 Hb_000723_060 Hb_000723_060 Hb_000137_030--Hb_000723_060 Hb_000137_030--Hb_005892_010 Hb_001587_220 Hb_001587_220 Hb_000137_030--Hb_001587_220 Hb_001013_060 Hb_001013_060 Hb_000203_150--Hb_001013_060 Hb_001610_060 Hb_001610_060 Hb_000203_150--Hb_001610_060 Hb_000032_340 Hb_000032_340 Hb_000203_150--Hb_000032_340 Hb_000720_060 Hb_000720_060 Hb_000203_150--Hb_000720_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.469667 0.112588 0.672263 0 0.0120002
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.2608 0.0916225

CAGE analysis