Hb_183433_010

Information

Type -
Description -
Location Contig183433: 18632-30615
Sequence    

Annotation

kegg
ID rcu:RCOM_1354290
description molybdopterin-binding, putative
nr
ID XP_012082439.1
description PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
swissprot
ID O74841
description Probable FAD synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1235.04c PE=3 SV=1
trembl
ID A0A067KA60
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16559 PE=4 SV=1
Gene Ontology
ID GO:0003824
description fad synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17927: 19206-19554 , PASA_asmbl_17928: 21109-31033
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183433_010 0.0 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
2 Hb_000976_140 0.05717173 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
3 Hb_171900_090 0.0580166537 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002413_010 0.0580886186 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_000189_600 0.0582069214 - - PREDICTED: protein MON2 homolog isoform X1 [Jatropha curcas]
6 Hb_007248_030 0.0597144003 - - PREDICTED: uncharacterized protein LOC105633558 [Jatropha curcas]
7 Hb_000365_230 0.0611106205 - - PREDICTED: uncharacterized protein LOC105649056 [Jatropha curcas]
8 Hb_000699_150 0.0620752517 - - PREDICTED: AT-hook motif nuclear-localized protein 14 [Jatropha curcas]
9 Hb_005730_040 0.0624303063 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
10 Hb_001623_270 0.0625520154 transcription factor TF Family: PHD Inhibitor of growth protein, putative [Ricinus communis]
11 Hb_163175_010 0.0629908715 - - hypothetical protein CISIN_1g036035mg, partial [Citrus sinensis]
12 Hb_000339_040 0.0643155049 - - PREDICTED: SAP30-binding protein isoform X2 [Jatropha curcas]
13 Hb_002849_130 0.0661019743 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
14 Hb_004333_040 0.0664124185 - - PREDICTED: uncharacterized protein LOC105629988 [Jatropha curcas]
15 Hb_002986_100 0.0674520705 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
16 Hb_164390_010 0.0676351302 transcription factor TF Family: bZIP PREDICTED: transcription factor HBP-1a [Jatropha curcas]
17 Hb_000111_170 0.0679350094 - - PREDICTED: uncharacterized protein LOC105631234 isoform X1 [Jatropha curcas]
18 Hb_000416_110 0.0691707829 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Jatropha curcas]
19 Hb_021374_030 0.069525522 - - hypothetical protein RCOM_0351490 [Ricinus communis]
20 Hb_000313_220 0.0698047263 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_183433_010 Hb_183433_010 Hb_000976_140 Hb_000976_140 Hb_183433_010--Hb_000976_140 Hb_171900_090 Hb_171900_090 Hb_183433_010--Hb_171900_090 Hb_002413_010 Hb_002413_010 Hb_183433_010--Hb_002413_010 Hb_000189_600 Hb_000189_600 Hb_183433_010--Hb_000189_600 Hb_007248_030 Hb_007248_030 Hb_183433_010--Hb_007248_030 Hb_000365_230 Hb_000365_230 Hb_183433_010--Hb_000365_230 Hb_005730_040 Hb_005730_040 Hb_000976_140--Hb_005730_040 Hb_000313_220 Hb_000313_220 Hb_000976_140--Hb_000313_220 Hb_002849_130 Hb_002849_130 Hb_000976_140--Hb_002849_130 Hb_015807_050 Hb_015807_050 Hb_000976_140--Hb_015807_050 Hb_001922_150 Hb_001922_150 Hb_000976_140--Hb_001922_150 Hb_000170_090 Hb_000170_090 Hb_000976_140--Hb_000170_090 Hb_000789_320 Hb_000789_320 Hb_171900_090--Hb_000789_320 Hb_164390_010 Hb_164390_010 Hb_171900_090--Hb_164390_010 Hb_002272_050 Hb_002272_050 Hb_171900_090--Hb_002272_050 Hb_000176_020 Hb_000176_020 Hb_171900_090--Hb_000176_020 Hb_001025_090 Hb_001025_090 Hb_171900_090--Hb_001025_090 Hb_027905_020 Hb_027905_020 Hb_002413_010--Hb_027905_020 Hb_002572_020 Hb_002572_020 Hb_002413_010--Hb_002572_020 Hb_002413_010--Hb_007248_030 Hb_000282_090 Hb_000282_090 Hb_002413_010--Hb_000282_090 Hb_003912_040 Hb_003912_040 Hb_002413_010--Hb_003912_040 Hb_004333_040 Hb_004333_040 Hb_000189_600--Hb_004333_040 Hb_000617_230 Hb_000617_230 Hb_000189_600--Hb_000617_230 Hb_001377_190 Hb_001377_190 Hb_000189_600--Hb_001377_190 Hb_001430_080 Hb_001430_080 Hb_000189_600--Hb_001430_080 Hb_000521_330 Hb_000521_330 Hb_000189_600--Hb_000521_330 Hb_004586_060 Hb_004586_060 Hb_007248_030--Hb_004586_060 Hb_001481_060 Hb_001481_060 Hb_007248_030--Hb_001481_060 Hb_001405_210 Hb_001405_210 Hb_007248_030--Hb_001405_210 Hb_000702_090 Hb_000702_090 Hb_007248_030--Hb_000702_090 Hb_002014_010 Hb_002014_010 Hb_007248_030--Hb_002014_010 Hb_001856_180 Hb_001856_180 Hb_007248_030--Hb_001856_180 Hb_000365_230--Hb_164390_010 Hb_004109_320 Hb_004109_320 Hb_000365_230--Hb_004109_320 Hb_007894_150 Hb_007894_150 Hb_000365_230--Hb_007894_150 Hb_003098_070 Hb_003098_070 Hb_000365_230--Hb_003098_070 Hb_062226_130 Hb_062226_130 Hb_000365_230--Hb_062226_130 Hb_000778_010 Hb_000778_010 Hb_000365_230--Hb_000778_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.58275 7.74791 10.2892 8.29939 4.94769 6.61653
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.92418 7.08536 3.89731 6.80869 8.08862

CAGE analysis