Hb_183610_010

Information

Type -
Description -
Location Contig183610: 6397-7047
Sequence    

Annotation

kegg
ID rcu:RCOM_0422220
description hypothetical protein
nr
ID XP_012074264.1
description PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUW9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08719 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17942: 6185-6278 , PASA_asmbl_17943: 6279-7362
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183610_010 0.0 - - PREDICTED: uncharacterized protein LOC105635777 [Jatropha curcas]
2 Hb_004117_120 0.094728476 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
3 Hb_005183_170 0.1137266251 - - PREDICTED: pentatricopeptide repeat-containing protein At2g04860 [Jatropha curcas]
4 Hb_000984_310 0.1285217718 - - Hydrolase, hydrolyzing O-glycosyl compounds, putative [Theobroma cacao]
5 Hb_001217_040 0.1509793066 - - hypothetical protein MIMGU_mgv1a0002421mg, partial [Erythranthe guttata]
6 Hb_000291_160 0.1514817188 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
7 Hb_000482_020 0.1522002489 - - cell wall invertase [Manihot esculenta]
8 Hb_000359_090 0.1531251644 - - PREDICTED: persulfide dioxygenase ETHE1 homolog, mitochondrial-like [Malus domestica]
9 Hb_000429_050 0.1564933764 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
10 Hb_000343_140 0.1578365472 - - PREDICTED: uncharacterized protein LOC105634966 [Jatropha curcas]
11 Hb_001486_190 0.1618425565 - - hypothetical protein JCGZ_02702 [Jatropha curcas]
12 Hb_000172_510 0.1682007114 - - hypothetical protein B456_007G243100 [Gossypium raimondii]
13 Hb_001766_080 0.1711239666 - - PREDICTED: uncharacterized protein LOC105644125 [Jatropha curcas]
14 Hb_000679_230 0.1718350937 - - PREDICTED: serine/threonine-protein kinase PRP4 homolog [Jatropha curcas]
15 Hb_003617_020 0.1720585883 - - PREDICTED: uncharacterized protein LOC105638179 [Jatropha curcas]
16 Hb_003938_160 0.174698174 - - PREDICTED: transcription factor bHLH155 [Jatropha curcas]
17 Hb_002781_030 0.1763288164 - - protein binding protein, putative [Ricinus communis]
18 Hb_012651_010 0.1763569263 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
19 Hb_002344_100 0.1776123231 - - PREDICTED: cation/calcium exchanger 4-like [Jatropha curcas]
20 Hb_024074_020 0.1793238157 - - PREDICTED: probable serine/threonine-protein kinase At1g09600 [Jatropha curcas]

Gene co-expression network

sample Hb_183610_010 Hb_183610_010 Hb_004117_120 Hb_004117_120 Hb_183610_010--Hb_004117_120 Hb_005183_170 Hb_005183_170 Hb_183610_010--Hb_005183_170 Hb_000984_310 Hb_000984_310 Hb_183610_010--Hb_000984_310 Hb_001217_040 Hb_001217_040 Hb_183610_010--Hb_001217_040 Hb_000291_160 Hb_000291_160 Hb_183610_010--Hb_000291_160 Hb_000482_020 Hb_000482_020 Hb_183610_010--Hb_000482_020 Hb_004117_120--Hb_005183_170 Hb_024074_020 Hb_024074_020 Hb_004117_120--Hb_024074_020 Hb_004117_120--Hb_000984_310 Hb_004117_120--Hb_000291_160 Hb_162547_010 Hb_162547_010 Hb_004117_120--Hb_162547_010 Hb_005183_170--Hb_000984_310 Hb_003617_020 Hb_003617_020 Hb_005183_170--Hb_003617_020 Hb_001486_190 Hb_001486_190 Hb_005183_170--Hb_001486_190 Hb_011671_080 Hb_011671_080 Hb_005183_170--Hb_011671_080 Hb_000984_310--Hb_001486_190 Hb_001051_070 Hb_001051_070 Hb_000984_310--Hb_001051_070 Hb_012651_010 Hb_012651_010 Hb_000984_310--Hb_012651_010 Hb_000836_280 Hb_000836_280 Hb_000984_310--Hb_000836_280 Hb_000679_100 Hb_000679_100 Hb_000984_310--Hb_000679_100 Hb_000140_350 Hb_000140_350 Hb_000984_310--Hb_000140_350 Hb_005539_310 Hb_005539_310 Hb_001217_040--Hb_005539_310 Hb_000260_600 Hb_000260_600 Hb_001217_040--Hb_000260_600 Hb_000359_140 Hb_000359_140 Hb_001217_040--Hb_000359_140 Hb_001217_040--Hb_000984_310 Hb_000245_080 Hb_000245_080 Hb_001217_040--Hb_000245_080 Hb_000890_230 Hb_000890_230 Hb_001217_040--Hb_000890_230 Hb_002660_110 Hb_002660_110 Hb_000291_160--Hb_002660_110 Hb_000739_200 Hb_000739_200 Hb_000291_160--Hb_000739_200 Hb_026740_020 Hb_026740_020 Hb_000291_160--Hb_026740_020 Hb_001999_100 Hb_001999_100 Hb_000291_160--Hb_001999_100 Hb_001217_010 Hb_001217_010 Hb_000291_160--Hb_001217_010 Hb_030827_070 Hb_030827_070 Hb_000482_020--Hb_030827_070 Hb_050454_010 Hb_050454_010 Hb_000482_020--Hb_050454_010 Hb_009646_040 Hb_009646_040 Hb_000482_020--Hb_009646_040 Hb_003571_030 Hb_003571_030 Hb_000482_020--Hb_003571_030 Hb_044736_010 Hb_044736_010 Hb_000482_020--Hb_044736_010 Hb_000483_220 Hb_000483_220 Hb_000482_020--Hb_000483_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.4458 11.8364 3.72616 34.9004 4.32604 9.48569
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.52949 6.2003 14.5809 5.12026 4.969

CAGE analysis