Hb_183612_060

Information

Type -
Description -
Location Contig183612: 29688-31927
Sequence    

Annotation

kegg
ID rcu:RCOM_1061840
description hypothetical protein
nr
ID XP_012069959.1
description PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUP4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03388 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183612_060 0.0 - - PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
2 Hb_003020_150 0.1105186593 - - tropinone reductase, putative [Ricinus communis]
3 Hb_002260_010 0.1225153382 - - PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Sesamum indicum]
4 Hb_006256_030 0.128110817 - - PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Jatropha curcas]
5 Hb_002232_060 0.1288239515 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
6 Hb_013399_050 0.1311048561 - - PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like isoform X2 [Jatropha curcas]
7 Hb_000997_190 0.1371576161 - - PREDICTED: magnesium transporter MRS2-I-like [Jatropha curcas]
8 Hb_061195_020 0.1395152369 - - PREDICTED: uncharacterized protein LOC101990594 [Microtus ochrogaster]
9 Hb_007037_020 0.1399327388 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 78 [Jatropha curcas]
10 Hb_000424_200 0.1403076366 - - hypothetical protein JCGZ_07583 [Jatropha curcas]
11 Hb_001979_020 0.1501572866 - - hypothetical protein OsJ_31823 [Oryza sativa Japonica Group]
12 Hb_003929_150 0.1522224275 - - PREDICTED: rRNA-processing protein fcf2-like [Jatropha curcas]
13 Hb_001172_120 0.1529325222 - - hypothetical protein B456_012G082000 [Gossypium raimondii]
14 Hb_002631_180 0.1534983689 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2 [Jatropha curcas]
15 Hb_002231_030 0.1538176278 - - PREDICTED: serine/threonine-protein kinase HT1 [Jatropha curcas]
16 Hb_011021_040 0.1548877835 transcription factor TF Family: Trihelix PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Jatropha curcas]
17 Hb_022318_020 0.1585694781 - - hypothetical protein JCGZ_00541 [Jatropha curcas]
18 Hb_006478_160 0.1596813094 - - 20S proteasome beta subunit D1 [Hevea brasiliensis]
19 Hb_000327_060 0.1598018547 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
20 Hb_013405_140 0.1601029066 - - PREDICTED: uncharacterized protein LOC105648437 [Jatropha curcas]

Gene co-expression network

sample Hb_183612_060 Hb_183612_060 Hb_003020_150 Hb_003020_150 Hb_183612_060--Hb_003020_150 Hb_002260_010 Hb_002260_010 Hb_183612_060--Hb_002260_010 Hb_006256_030 Hb_006256_030 Hb_183612_060--Hb_006256_030 Hb_002232_060 Hb_002232_060 Hb_183612_060--Hb_002232_060 Hb_013399_050 Hb_013399_050 Hb_183612_060--Hb_013399_050 Hb_000997_190 Hb_000997_190 Hb_183612_060--Hb_000997_190 Hb_001979_020 Hb_001979_020 Hb_003020_150--Hb_001979_020 Hb_000163_050 Hb_000163_050 Hb_003020_150--Hb_000163_050 Hb_003020_150--Hb_002232_060 Hb_002016_080 Hb_002016_080 Hb_003020_150--Hb_002016_080 Hb_003880_030 Hb_003880_030 Hb_003020_150--Hb_003880_030 Hb_003020_150--Hb_002260_010 Hb_024074_010 Hb_024074_010 Hb_002260_010--Hb_024074_010 Hb_002260_010--Hb_006256_030 Hb_001252_220 Hb_001252_220 Hb_002260_010--Hb_001252_220 Hb_000731_190 Hb_000731_190 Hb_002260_010--Hb_000731_190 Hb_001493_050 Hb_001493_050 Hb_002260_010--Hb_001493_050 Hb_163256_020 Hb_163256_020 Hb_006256_030--Hb_163256_020 Hb_002060_010 Hb_002060_010 Hb_006256_030--Hb_002060_010 Hb_022318_020 Hb_022318_020 Hb_006256_030--Hb_022318_020 Hb_158445_010 Hb_158445_010 Hb_006256_030--Hb_158445_010 Hb_001718_030 Hb_001718_030 Hb_006256_030--Hb_001718_030 Hb_002232_060--Hb_001979_020 Hb_005843_140 Hb_005843_140 Hb_002232_060--Hb_005843_140 Hb_000072_200 Hb_000072_200 Hb_002232_060--Hb_000072_200 Hb_000465_070 Hb_000465_070 Hb_002232_060--Hb_000465_070 Hb_006198_070 Hb_006198_070 Hb_002232_060--Hb_006198_070 Hb_011021_040 Hb_011021_040 Hb_013399_050--Hb_011021_040 Hb_000424_200 Hb_000424_200 Hb_013399_050--Hb_000424_200 Hb_007037_020 Hb_007037_020 Hb_013399_050--Hb_007037_020 Hb_013405_140 Hb_013405_140 Hb_013399_050--Hb_013405_140 Hb_000327_060 Hb_000327_060 Hb_013399_050--Hb_000327_060 Hb_013399_050--Hb_158445_010 Hb_001172_120 Hb_001172_120 Hb_000997_190--Hb_001172_120 Hb_006006_050 Hb_006006_050 Hb_000997_190--Hb_006006_050 Hb_001235_110 Hb_001235_110 Hb_000997_190--Hb_001235_110 Hb_006478_160 Hb_006478_160 Hb_000997_190--Hb_006478_160 Hb_000567_410 Hb_000567_410 Hb_000997_190--Hb_000567_410 Hb_002231_030 Hb_002231_030 Hb_000997_190--Hb_002231_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.344378 1.23183 0.783314 0.56388 0.325505 0.169612
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.31042 3.59098 1.48325 0.990164 1.20219

CAGE analysis