Hb_183820_010

Information

Type -
Description -
Location Contig183820: 239-715
Sequence    

Annotation

kegg
ID rcu:RCOM_1331600
description Disease resistance protein RFL1, putative (EC:3.1.3.16)
nr
ID XP_002521789.1
description Disease resistance protein RFL1, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S720
description Disease resistance protein RFL1, putative OS=Ricinus communis GN=RCOM_1331600 PE=4 SV=1
Gene Ontology
ID GO:0000166
description probable disease resistance protein at4g27220 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183820_010 0.0 - - Disease resistance protein RFL1, putative [Ricinus communis]
2 Hb_136884_010 0.0892841232 - - Disease resistance protein RFL1, putative [Ricinus communis]
3 Hb_012395_150 0.1144140505 transcription factor TF Family: Orphans PREDICTED: two-component response regulator-like APRR7 [Jatropha curcas]
4 Hb_000002_230 0.1230993501 - - RING/U-box superfamily protein [Theobroma cacao]
5 Hb_000365_290 0.1328457601 - - PREDICTED: protein MTL1-like isoform X1 [Jatropha curcas]
6 Hb_006020_010 0.1333166105 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
7 Hb_004590_010 0.1341344711 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
8 Hb_179118_010 0.1357234312 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
9 Hb_002289_110 0.1368523418 - - PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Jatropha curcas]
10 Hb_001369_530 0.1418608033 - - 21 kDa protein precursor, putative [Ricinus communis]
11 Hb_002735_010 0.1424432374 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
12 Hb_006395_010 0.143668824 - - hypothetical protein RCOM_0725500 [Ricinus communis]
13 Hb_017661_020 0.1469612859 - - hypothetical protein JCGZ_11176 [Jatropha curcas]
14 Hb_002762_070 0.1471225022 transcription factor TF Family: HB homeobox protein knotted-1, putative [Ricinus communis]
15 Hb_000586_100 0.1476353498 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004635_040 0.1491121169 - - Polyprotein, putative [Solanum demissum]
17 Hb_000127_070 0.1496089642 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
18 Hb_005144_100 0.1512503955 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
19 Hb_002894_040 0.1547951154 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002053_090 0.1580844429 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_183820_010 Hb_183820_010 Hb_136884_010 Hb_136884_010 Hb_183820_010--Hb_136884_010 Hb_012395_150 Hb_012395_150 Hb_183820_010--Hb_012395_150 Hb_000002_230 Hb_000002_230 Hb_183820_010--Hb_000002_230 Hb_000365_290 Hb_000365_290 Hb_183820_010--Hb_000365_290 Hb_006020_010 Hb_006020_010 Hb_183820_010--Hb_006020_010 Hb_004590_010 Hb_004590_010 Hb_183820_010--Hb_004590_010 Hb_002289_110 Hb_002289_110 Hb_136884_010--Hb_002289_110 Hb_001976_120 Hb_001976_120 Hb_136884_010--Hb_001976_120 Hb_008001_020 Hb_008001_020 Hb_136884_010--Hb_008001_020 Hb_136884_010--Hb_012395_150 Hb_136884_010--Hb_000365_290 Hb_012395_150--Hb_004590_010 Hb_179118_010 Hb_179118_010 Hb_012395_150--Hb_179118_010 Hb_006395_010 Hb_006395_010 Hb_012395_150--Hb_006395_010 Hb_017661_020 Hb_017661_020 Hb_012395_150--Hb_017661_020 Hb_012879_010 Hb_012879_010 Hb_012395_150--Hb_012879_010 Hb_000203_150 Hb_000203_150 Hb_000002_230--Hb_000203_150 Hb_002894_040 Hb_002894_040 Hb_000002_230--Hb_002894_040 Hb_000002_230--Hb_179118_010 Hb_183209_020 Hb_183209_020 Hb_000002_230--Hb_183209_020 Hb_000002_230--Hb_004590_010 Hb_002762_070 Hb_002762_070 Hb_000365_290--Hb_002762_070 Hb_000365_290--Hb_006395_010 Hb_001283_010 Hb_001283_010 Hb_000365_290--Hb_001283_010 Hb_027445_080 Hb_027445_080 Hb_000365_290--Hb_027445_080 Hb_028207_030 Hb_028207_030 Hb_000365_290--Hb_028207_030 Hb_000077_460 Hb_000077_460 Hb_000365_290--Hb_000077_460 Hb_000586_100 Hb_000586_100 Hb_006020_010--Hb_000586_100 Hb_000907_120 Hb_000907_120 Hb_006020_010--Hb_000907_120 Hb_003439_090 Hb_003439_090 Hb_006020_010--Hb_003439_090 Hb_000407_080 Hb_000407_080 Hb_006020_010--Hb_000407_080 Hb_000152_250 Hb_000152_250 Hb_006020_010--Hb_000152_250 Hb_006364_020 Hb_006364_020 Hb_006020_010--Hb_006364_020 Hb_004590_010--Hb_179118_010 Hb_004590_010--Hb_012879_010 Hb_005900_020 Hb_005900_020 Hb_004590_010--Hb_005900_020 Hb_106728_020 Hb_106728_020 Hb_004590_010--Hb_106728_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.309267 6.93739 0.950693 8.54778 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.66812 0.210865

CAGE analysis