Hb_183980_010

Information

Type -
Description -
Location Contig183980: 3-503
Sequence    

Annotation

kegg
ID rcu:RCOM_2009430
description histone-lysine n-methyltransferase, suvh, putative
nr
ID XP_012077634.1
description PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
swissprot
ID O22781
description Histone-lysine N-methyltransferase family member SUVH2 OS=Arabidopsis thaliana GN=SUVH2 PE=1 SV=1
trembl
ID A0A067KB37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12891 PE=4 SV=1
Gene Ontology
ID GO:0043229
description histone-lysine n-methyltransferase family member suvh9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_183980_010 0.0 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
2 Hb_000125_040 0.1525784437 - - -
3 Hb_176117_010 0.1558750398 - - Cold-inducible RNA-binding protein [Morus notabilis]
4 Hb_000200_040 0.1632806697 - - -
5 Hb_023327_030 0.1673759408 - - osmotin-like protein [Hevea brasiliensis]
6 Hb_001582_030 0.1711271319 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
7 Hb_077211_010 0.1758209302 - - PREDICTED: lariat debranching enzyme-like [Jatropha curcas]
8 Hb_188964_010 0.1767973504 - - maintenance of killer 16 (mak16) protein, putative [Ricinus communis]
9 Hb_113216_010 0.1773448299 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
10 Hb_000016_180 0.1791964003 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
11 Hb_000025_310 0.1800854256 - - conserved hypothetical protein [Ricinus communis]
12 Hb_019871_020 0.180442594 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
13 Hb_005000_270 0.1805868582 - - unnamed protein product [Vitis vinifera]
14 Hb_181320_010 0.1806790568 - - PREDICTED: signal recognition particle 14 kDa protein [Jatropha curcas]
15 Hb_010189_010 0.1809465312 - - -
16 Hb_175612_010 0.1809978326 transcription factor TF Family: MBF1 orf [Ricinus communis]
17 Hb_007111_040 0.1829356863 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
18 Hb_150528_010 0.1837727811 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000441_160 0.1846953742 - - ARF GTPase activator, putative [Ricinus communis]
20 Hb_000732_020 0.1855128789 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_183980_010 Hb_183980_010 Hb_000125_040 Hb_000125_040 Hb_183980_010--Hb_000125_040 Hb_176117_010 Hb_176117_010 Hb_183980_010--Hb_176117_010 Hb_000200_040 Hb_000200_040 Hb_183980_010--Hb_000200_040 Hb_023327_030 Hb_023327_030 Hb_183980_010--Hb_023327_030 Hb_001582_030 Hb_001582_030 Hb_183980_010--Hb_001582_030 Hb_077211_010 Hb_077211_010 Hb_183980_010--Hb_077211_010 Hb_150204_010 Hb_150204_010 Hb_000125_040--Hb_150204_010 Hb_015026_060 Hb_015026_060 Hb_000125_040--Hb_015026_060 Hb_000613_100 Hb_000613_100 Hb_000125_040--Hb_000613_100 Hb_175612_010 Hb_175612_010 Hb_000125_040--Hb_175612_010 Hb_002774_070 Hb_002774_070 Hb_000125_040--Hb_002774_070 Hb_181320_010 Hb_181320_010 Hb_176117_010--Hb_181320_010 Hb_005016_150 Hb_005016_150 Hb_176117_010--Hb_005016_150 Hb_000270_500 Hb_000270_500 Hb_176117_010--Hb_000270_500 Hb_144898_010 Hb_144898_010 Hb_176117_010--Hb_144898_010 Hb_176117_010--Hb_000200_040 Hb_012807_080 Hb_012807_080 Hb_000200_040--Hb_012807_080 Hb_006455_110 Hb_006455_110 Hb_000200_040--Hb_006455_110 Hb_005965_010 Hb_005965_010 Hb_000200_040--Hb_005965_010 Hb_006455_080 Hb_006455_080 Hb_000200_040--Hb_006455_080 Hb_139859_010 Hb_139859_010 Hb_000200_040--Hb_139859_010 Hb_002475_050 Hb_002475_050 Hb_023327_030--Hb_002475_050 Hb_005000_270 Hb_005000_270 Hb_023327_030--Hb_005000_270 Hb_000256_270 Hb_000256_270 Hb_023327_030--Hb_000256_270 Hb_079326_010 Hb_079326_010 Hb_023327_030--Hb_079326_010 Hb_002918_070 Hb_002918_070 Hb_023327_030--Hb_002918_070 Hb_003716_020 Hb_003716_020 Hb_023327_030--Hb_003716_020 Hb_001582_030--Hb_005000_270 Hb_000212_280 Hb_000212_280 Hb_001582_030--Hb_000212_280 Hb_000134_360 Hb_000134_360 Hb_001582_030--Hb_000134_360 Hb_019871_020 Hb_019871_020 Hb_001582_030--Hb_019871_020 Hb_008528_010 Hb_008528_010 Hb_001582_030--Hb_008528_010 Hb_000732_020 Hb_000732_020 Hb_001582_030--Hb_000732_020 Hb_130134_030 Hb_130134_030 Hb_077211_010--Hb_130134_030 Hb_007137_060 Hb_007137_060 Hb_077211_010--Hb_007137_060 Hb_006960_030 Hb_006960_030 Hb_077211_010--Hb_006960_030 Hb_003297_020 Hb_003297_020 Hb_077211_010--Hb_003297_020 Hb_001935_190 Hb_001935_190 Hb_077211_010--Hb_001935_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.88114 1.04162 0.630501 0.815098 4.53608 7.412
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.535095 1.47132 1.42492 0.393131 0

CAGE analysis