Hb_184942_010

Information

Type -
Description -
Location Contig184942: 768-1289
Sequence    

Annotation

kegg
ID rcu:RCOM_0604210
description STS14 protein precursor, putative
nr
ID XP_002522391.1
description STS14 protein precursor, putative [Ricinus communis]
swissprot
ID Q41495
description STS14 protein OS=Solanum tuberosum GN=STS14 PE=2 SV=1
trembl
ID B9S8S2
description STS14 protein, putative OS=Ricinus communis GN=RCOM_0604210 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_184942_010 0.0 - - STS14 protein precursor, putative [Ricinus communis]
2 Hb_172633_020 0.0748603655 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Populus euphratica]
3 Hb_000963_010 0.0867961209 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]
4 Hb_150084_010 0.0923356289 - - PREDICTED: premnaspirodiene oxygenase-like [Vitis vinifera]
5 Hb_001158_080 0.0968440875 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
6 Hb_002490_090 0.0994510525 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
7 Hb_002042_160 0.1035710857 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
8 Hb_003787_060 0.1120507465 - - PREDICTED: mechanosensitive ion channel protein 8-like [Jatropha curcas]
9 Hb_000934_290 0.1144791013 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000172_740 0.121601554 - - HXXXD-type acyl-transferase family protein, putative [Theobroma cacao]
11 Hb_002333_010 0.1248101351 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
12 Hb_003788_010 0.1262739587 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
13 Hb_001514_070 0.1277453093 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_039496_010 0.1283409682 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
15 Hb_003805_080 0.131568829 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
16 Hb_001863_080 0.1320265697 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
17 Hb_000236_050 0.1324018293 - - phosphate transporter [Manihot esculenta]
18 Hb_000317_220 0.1351429349 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004712_020 0.1369478657 - - hypothetical protein JCGZ_00782 [Jatropha curcas]
20 Hb_001470_040 0.1372645612 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]

Gene co-expression network

sample Hb_184942_010 Hb_184942_010 Hb_172633_020 Hb_172633_020 Hb_184942_010--Hb_172633_020 Hb_000963_010 Hb_000963_010 Hb_184942_010--Hb_000963_010 Hb_150084_010 Hb_150084_010 Hb_184942_010--Hb_150084_010 Hb_001158_080 Hb_001158_080 Hb_184942_010--Hb_001158_080 Hb_002490_090 Hb_002490_090 Hb_184942_010--Hb_002490_090 Hb_002042_160 Hb_002042_160 Hb_184942_010--Hb_002042_160 Hb_172633_020--Hb_002490_090 Hb_172633_020--Hb_002042_160 Hb_172633_020--Hb_150084_010 Hb_006120_030 Hb_006120_030 Hb_172633_020--Hb_006120_030 Hb_172633_020--Hb_000963_010 Hb_000963_010--Hb_150084_010 Hb_002333_010 Hb_002333_010 Hb_000963_010--Hb_002333_010 Hb_003787_060 Hb_003787_060 Hb_000963_010--Hb_003787_060 Hb_039496_010 Hb_039496_010 Hb_000963_010--Hb_039496_010 Hb_012787_050 Hb_012787_050 Hb_000963_010--Hb_012787_050 Hb_150084_010--Hb_002333_010 Hb_000172_740 Hb_000172_740 Hb_150084_010--Hb_000172_740 Hb_150084_010--Hb_002042_160 Hb_000934_290 Hb_000934_290 Hb_001158_080--Hb_000934_290 Hb_002551_090 Hb_002551_090 Hb_001158_080--Hb_002551_090 Hb_008140_060 Hb_008140_060 Hb_001158_080--Hb_008140_060 Hb_009642_010 Hb_009642_010 Hb_001158_080--Hb_009642_010 Hb_001158_080--Hb_003787_060 Hb_002490_090--Hb_006120_030 Hb_000917_120 Hb_000917_120 Hb_002490_090--Hb_000917_120 Hb_007123_020 Hb_007123_020 Hb_002490_090--Hb_007123_020 Hb_002490_090--Hb_150084_010 Hb_000994_100 Hb_000994_100 Hb_002042_160--Hb_000994_100 Hb_002970_070 Hb_002970_070 Hb_002042_160--Hb_002970_070 Hb_055529_010 Hb_055529_010 Hb_002042_160--Hb_055529_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.16971 1.54574 10.4789 0.104379 0.0936862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.125163 0.0983379 0 18.4894 4.45304

CAGE analysis