Hb_185111_010

Information

Type -
Description -
Location Contig185111: 2799-3056
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185111_010 0.0 - - -
2 Hb_000318_090 0.0761371789 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
3 Hb_000718_050 0.1064277624 - - PREDICTED: histone deacetylase 15 isoform X2 [Populus euphratica]
4 Hb_000892_020 0.1151543888 - - unnamed protein product [Vitis vinifera]
5 Hb_001729_040 0.1593120327 - - hypothetical protein glysoja_049826, partial [Glycine soja]
6 Hb_112440_010 0.1714209874 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
7 Hb_007181_030 0.1793938171 - - PREDICTED: uncharacterized protein LOC105649502 isoform X2 [Jatropha curcas]
8 Hb_000087_090 0.2053148727 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL61 [Jatropha curcas]
9 Hb_001946_020 0.2057754699 - - hypothetical protein RCOM_0224470 [Ricinus communis]
10 Hb_003095_080 0.2151672846 - - -
11 Hb_008054_060 0.2355449028 - - PREDICTED: beta-amyrin synthase-like [Populus euphratica]
12 Hb_004267_030 0.243211853 - - cytochrome P450, putative [Ricinus communis]
13 Hb_015220_010 0.2639897213 - - PREDICTED: ribonuclease 3-like protein 3 [Jatropha curcas]
14 Hb_003266_070 0.2927998421 - - -
15 Hb_003960_020 0.3134574305 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_000866_250 0.318024032 - - acyl-CoA thioesterase, putative [Ricinus communis]
17 Hb_000164_060 0.3208652075 - - -
18 Hb_000032_580 0.3349435139 - - hypothetical protein RCOM_1311780 [Ricinus communis]
19 Hb_016875_010 0.3349915462 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_004947_010 0.3406955233 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]

Gene co-expression network

sample Hb_185111_010 Hb_185111_010 Hb_000318_090 Hb_000318_090 Hb_185111_010--Hb_000318_090 Hb_000718_050 Hb_000718_050 Hb_185111_010--Hb_000718_050 Hb_000892_020 Hb_000892_020 Hb_185111_010--Hb_000892_020 Hb_001729_040 Hb_001729_040 Hb_185111_010--Hb_001729_040 Hb_112440_010 Hb_112440_010 Hb_185111_010--Hb_112440_010 Hb_007181_030 Hb_007181_030 Hb_185111_010--Hb_007181_030 Hb_000318_090--Hb_001729_040 Hb_000318_090--Hb_000892_020 Hb_000318_090--Hb_000718_050 Hb_000318_090--Hb_007181_030 Hb_000087_090 Hb_000087_090 Hb_000318_090--Hb_000087_090 Hb_000718_050--Hb_000892_020 Hb_000718_050--Hb_112440_010 Hb_008054_060 Hb_008054_060 Hb_000718_050--Hb_008054_060 Hb_000718_050--Hb_001729_040 Hb_000892_020--Hb_001729_040 Hb_000892_020--Hb_112440_010 Hb_015220_010 Hb_015220_010 Hb_000892_020--Hb_015220_010 Hb_000164_060 Hb_000164_060 Hb_001729_040--Hb_000164_060 Hb_001729_040--Hb_015220_010 Hb_112440_010--Hb_008054_060 Hb_004947_010 Hb_004947_010 Hb_112440_010--Hb_004947_010 Hb_003095_080 Hb_003095_080 Hb_112440_010--Hb_003095_080 Hb_001946_020 Hb_001946_020 Hb_007181_030--Hb_001946_020 Hb_004267_030 Hb_004267_030 Hb_007181_030--Hb_004267_030 Hb_007181_030--Hb_003095_080 Hb_007181_030--Hb_000087_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.47125 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 4.048 0 2.94974 0

CAGE analysis