Hb_185437_010

Information

Type -
Description -
Location Contig185437: 834-2513
Sequence    

Annotation

kegg
ID pop:POPTR_0013s11450g
description hypothetical protein
nr
ID XP_012075794.1
description PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KRB2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11177 PE=4 SV=1
Gene Ontology
ID GO:0006259
description fanconi anemia group m protein isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185437_010 0.0 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
2 Hb_001518_050 0.0182593472 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
3 Hb_039440_010 0.0327773987 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000025_800 0.0456924749 - - hypothetical protein VITISV_020143 [Vitis vinifera]
5 Hb_010252_010 0.0577018096 - - -
6 Hb_119583_030 0.065969998 - - unnamed protein product [Vitis vinifera]
7 Hb_160950_010 0.0697085617 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
8 Hb_002163_070 0.0754940722 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
9 Hb_009083_020 0.0780040545 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
10 Hb_149194_010 0.0911089596 - - hypothetical protein JCGZ_17021 [Jatropha curcas]
11 Hb_000072_010 0.1017482995 - - hypothetical protein B456_006G246700 [Gossypium raimondii]
12 Hb_000908_030 0.1024096172 - - small heat-shock protein, putative [Ricinus communis]
13 Hb_005428_010 0.1070529784 - - cytochrome P450, putative [Ricinus communis]
14 Hb_057721_010 0.10718631 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
15 Hb_003878_130 0.1079259586 - - -
16 Hb_005773_010 0.1101200418 - - -
17 Hb_179367_020 0.1135521492 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_137862_020 0.1159665319 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
19 Hb_000483_120 0.1182658453 transcription factor TF Family: MYB hypothetical protein POPTR_0004s12530g [Populus trichocarpa]
20 Hb_177179_020 0.1247249867 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_185437_010 Hb_185437_010 Hb_001518_050 Hb_001518_050 Hb_185437_010--Hb_001518_050 Hb_039440_010 Hb_039440_010 Hb_185437_010--Hb_039440_010 Hb_000025_800 Hb_000025_800 Hb_185437_010--Hb_000025_800 Hb_010252_010 Hb_010252_010 Hb_185437_010--Hb_010252_010 Hb_119583_030 Hb_119583_030 Hb_185437_010--Hb_119583_030 Hb_160950_010 Hb_160950_010 Hb_185437_010--Hb_160950_010 Hb_001518_050--Hb_039440_010 Hb_001518_050--Hb_000025_800 Hb_001518_050--Hb_119583_030 Hb_001518_050--Hb_010252_010 Hb_001518_050--Hb_160950_010 Hb_039440_010--Hb_160950_010 Hb_039440_010--Hb_010252_010 Hb_000072_010 Hb_000072_010 Hb_039440_010--Hb_000072_010 Hb_009083_020 Hb_009083_020 Hb_039440_010--Hb_009083_020 Hb_000025_800--Hb_119583_030 Hb_000025_800--Hb_010252_010 Hb_002163_070 Hb_002163_070 Hb_000025_800--Hb_002163_070 Hb_057721_010 Hb_057721_010 Hb_000025_800--Hb_057721_010 Hb_010252_010--Hb_002163_070 Hb_010252_010--Hb_009083_020 Hb_010252_010--Hb_160950_010 Hb_010252_010--Hb_119583_030 Hb_119583_030--Hb_057721_010 Hb_119583_030--Hb_002163_070 Hb_000483_120 Hb_000483_120 Hb_119583_030--Hb_000483_120 Hb_160950_010--Hb_009083_020 Hb_160950_010--Hb_002163_070 Hb_000248_080 Hb_000248_080 Hb_160950_010--Hb_000248_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.193492 0.348495 0.635266 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis