Hb_185474_020

Information

Type -
Description -
Location Contig185474: 2116-3264
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID KDP37049.1
description hypothetical protein JCGZ_06105 [Jatropha curcas]
swissprot
ID C0LGS2
description Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=2 SV=1
trembl
ID A0A067KYW7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06105 PE=4 SV=1
Gene Ontology
ID GO:0005515
description probable lrr receptor-like serine threonine-protein kinase at4g36180

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185474_020 0.0 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
2 Hb_010311_020 0.0632951517 - - lrr receptor protein kinase, putative [Ricinus communis]
3 Hb_003142_080 0.0785322449 - - receptor serine/threonine kinase, putative [Ricinus communis]
4 Hb_006198_040 0.0800952182 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000380_140 0.0817440064 - - PREDICTED: uncharacterized protein LOC105628069 [Jatropha curcas]
6 Hb_001652_130 0.0832659883 - - hypothetical protein B456_002G193900 [Gossypium raimondii]
7 Hb_124579_020 0.0859071097 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Jatropha curcas]
8 Hb_000416_010 0.0942514079 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
9 Hb_002122_070 0.0963280274 - - unnamed protein product [Vitis vinifera]
10 Hb_039435_020 0.096330728 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
11 Hb_002635_010 0.1003939748 - - homogentisate phytyl transferase [Hevea brasiliensis]
12 Hb_002943_020 0.1048856173 - - hypothetical protein POPTR_0075s00240g, partial [Populus trichocarpa]
13 Hb_006970_120 0.1107081142 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000033_010 0.113012577 - - Protein MLO, putative [Ricinus communis]
15 Hb_029223_010 0.11554845 - - PREDICTED: ACT domain-containing protein ACR10 [Jatropha curcas]
16 Hb_000705_040 0.1159741578 - - conserved hypothetical protein [Ricinus communis]
17 Hb_004946_010 0.1176325697 - - hypothetical protein POPTR_0013s035502g, partial [Populus trichocarpa]
18 Hb_004724_260 0.1187893708 - - PREDICTED: 40S ribosomal protein S14-2-like [Gossypium raimondii]
19 Hb_000130_480 0.1190129001 - - PREDICTED: histone-lysine N-methyltransferase SETD1B [Jatropha curcas]
20 Hb_188075_010 0.1211366301 - - PREDICTED: uncharacterized protein LOC105775124 [Gossypium raimondii]

Gene co-expression network

sample Hb_185474_020 Hb_185474_020 Hb_010311_020 Hb_010311_020 Hb_185474_020--Hb_010311_020 Hb_003142_080 Hb_003142_080 Hb_185474_020--Hb_003142_080 Hb_006198_040 Hb_006198_040 Hb_185474_020--Hb_006198_040 Hb_000380_140 Hb_000380_140 Hb_185474_020--Hb_000380_140 Hb_001652_130 Hb_001652_130 Hb_185474_020--Hb_001652_130 Hb_124579_020 Hb_124579_020 Hb_185474_020--Hb_124579_020 Hb_000416_010 Hb_000416_010 Hb_010311_020--Hb_000416_010 Hb_010311_020--Hb_124579_020 Hb_010311_020--Hb_000380_140 Hb_002635_010 Hb_002635_010 Hb_010311_020--Hb_002635_010 Hb_010311_020--Hb_006198_040 Hb_003142_080--Hb_006198_040 Hb_003142_080--Hb_124579_020 Hb_000033_010 Hb_000033_010 Hb_003142_080--Hb_000033_010 Hb_003142_080--Hb_002635_010 Hb_029223_010 Hb_029223_010 Hb_003142_080--Hb_029223_010 Hb_000130_480 Hb_000130_480 Hb_006198_040--Hb_000130_480 Hb_006198_040--Hb_000033_010 Hb_006198_040--Hb_124579_020 Hb_000836_030 Hb_000836_030 Hb_006198_040--Hb_000836_030 Hb_006970_120 Hb_006970_120 Hb_000380_140--Hb_006970_120 Hb_000380_140--Hb_002635_010 Hb_004946_010 Hb_004946_010 Hb_000380_140--Hb_004946_010 Hb_000380_140--Hb_124579_020 Hb_188075_010 Hb_188075_010 Hb_001652_130--Hb_188075_010 Hb_001652_130--Hb_000033_010 Hb_001652_130--Hb_006198_040 Hb_001652_130--Hb_003142_080 Hb_002943_020 Hb_002943_020 Hb_001652_130--Hb_002943_020 Hb_124579_020--Hb_000130_480 Hb_124579_020--Hb_000416_010 Hb_124579_020--Hb_002635_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0716534 0.189511 0.192584 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.161758 0.555271

CAGE analysis