Hb_185736_010

Information

Type -
Description -
Location Contig185736: 30195-31161
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185736_010 0.0 - - -
2 Hb_007273_010 0.011550579 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
3 Hb_187134_010 0.0196388594 - - -
4 Hb_000111_020 0.0595938819 - - hypothetical protein SORBIDRAFT_04g003755 [Sorghum bicolor]
5 Hb_001627_030 0.0829577371 - - hypothetical protein JCGZ_11752 [Jatropha curcas]
6 Hb_096292_010 0.0882473386 - - hypothetical protein JCGZ_25718 [Jatropha curcas]
7 Hb_011016_040 0.1156083952 - - calcium-dependent protein kinase, putative [Ricinus communis]
8 Hb_000143_040 0.1156328131 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
9 Hb_000258_190 0.1161967546 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
10 Hb_003388_090 0.1166780834 - - putative beta-D-xylosidase 5 -like protein [Gossypium arboreum]
11 Hb_000265_180 0.1175429872 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]
12 Hb_004881_110 0.1193442544 - - -
13 Hb_001369_330 0.1194169043 - - conserved hypothetical protein [Ricinus communis]
14 Hb_010120_010 0.1200737726 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
15 Hb_010267_010 0.1209556531 - - -
16 Hb_000002_200 0.1323771055 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096 [Brassica rapa]
17 Hb_035492_010 0.1418032726 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
18 Hb_000635_120 0.1453223639 - - -
19 Hb_001999_110 0.1454372427 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
20 Hb_011457_060 0.1464422862 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]

Gene co-expression network

sample Hb_185736_010 Hb_185736_010 Hb_007273_010 Hb_007273_010 Hb_185736_010--Hb_007273_010 Hb_187134_010 Hb_187134_010 Hb_185736_010--Hb_187134_010 Hb_000111_020 Hb_000111_020 Hb_185736_010--Hb_000111_020 Hb_001627_030 Hb_001627_030 Hb_185736_010--Hb_001627_030 Hb_096292_010 Hb_096292_010 Hb_185736_010--Hb_096292_010 Hb_011016_040 Hb_011016_040 Hb_185736_010--Hb_011016_040 Hb_007273_010--Hb_187134_010 Hb_007273_010--Hb_000111_020 Hb_007273_010--Hb_096292_010 Hb_007273_010--Hb_001627_030 Hb_007273_010--Hb_011016_040 Hb_187134_010--Hb_000111_020 Hb_187134_010--Hb_011016_040 Hb_000143_040 Hb_000143_040 Hb_187134_010--Hb_000143_040 Hb_000258_190 Hb_000258_190 Hb_187134_010--Hb_000258_190 Hb_000111_020--Hb_001627_030 Hb_000002_200 Hb_000002_200 Hb_000111_020--Hb_000002_200 Hb_000111_020--Hb_096292_010 Hb_001627_030--Hb_000002_200 Hb_001627_030--Hb_096292_010 Hb_034661_020 Hb_034661_020 Hb_001627_030--Hb_034661_020 Hb_096292_010--Hb_187134_010 Hb_096292_010--Hb_000002_200 Hb_011016_040--Hb_000143_040 Hb_011016_040--Hb_000258_190 Hb_003388_090 Hb_003388_090 Hb_011016_040--Hb_003388_090 Hb_000265_180 Hb_000265_180 Hb_011016_040--Hb_000265_180 Hb_004881_110 Hb_004881_110 Hb_011016_040--Hb_004881_110 Hb_001369_330 Hb_001369_330 Hb_011016_040--Hb_001369_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 6.70587 0 1.38726 0

CAGE analysis