Hb_186158_010

Information

Type -
Description -
Location Contig186158: 2996-4527
Sequence    

Annotation

kegg
ID rcu:RCOM_0205120
description hypothetical protein
nr
ID XP_002527981.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SPR2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0205120 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186158_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000975_270 0.1902933386 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
3 Hb_000046_200 0.2206606716 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]
4 Hb_032974_010 0.2358105482 - - -
5 Hb_011224_040 0.2362017602 - - PREDICTED: ER membrane protein complex subunit 8/9 homolog [Jatropha curcas]
6 Hb_182005_010 0.2478173489 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
7 Hb_005199_010 0.2482529889 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000915_100 0.2488039562 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
9 Hb_000275_010 0.2498212083 - - -
10 Hb_004097_040 0.2547430794 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]
11 Hb_002094_040 0.2577731553 - - Organic cation transporter protein [Aegilops tauschii]
12 Hb_001842_120 0.258623928 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
13 Hb_005714_050 0.2614356486 transcription factor TF Family: B3 hypothetical protein POPTR_1461s00200g [Populus trichocarpa]
14 Hb_000363_270 0.2634110689 - - hypothetical protein PRUPE_ppa024846mg [Prunus persica]
15 Hb_109578_010 0.2635829815 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000500_210 0.269738424 - - -
17 Hb_002259_140 0.2697521512 - - -
18 Hb_000345_430 0.2733438441 - - 40S ribosomal protein S24A [Hevea brasiliensis]
19 Hb_001016_070 0.2761545385 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
20 Hb_021906_010 0.2800895977 - - PREDICTED: cysteine proteinase inhibitor-like [Populus euphratica]

Gene co-expression network

sample Hb_186158_010 Hb_186158_010 Hb_000975_270 Hb_000975_270 Hb_186158_010--Hb_000975_270 Hb_000046_200 Hb_000046_200 Hb_186158_010--Hb_000046_200 Hb_032974_010 Hb_032974_010 Hb_186158_010--Hb_032974_010 Hb_011224_040 Hb_011224_040 Hb_186158_010--Hb_011224_040 Hb_182005_010 Hb_182005_010 Hb_186158_010--Hb_182005_010 Hb_005199_010 Hb_005199_010 Hb_186158_010--Hb_005199_010 Hb_000975_270--Hb_032974_010 Hb_005714_050 Hb_005714_050 Hb_000975_270--Hb_005714_050 Hb_000975_270--Hb_011224_040 Hb_000975_270--Hb_000046_200 Hb_069022_010 Hb_069022_010 Hb_000975_270--Hb_069022_010 Hb_000046_200--Hb_011224_040 Hb_000915_100 Hb_000915_100 Hb_000046_200--Hb_000915_100 Hb_001842_120 Hb_001842_120 Hb_000046_200--Hb_001842_120 Hb_000500_210 Hb_000500_210 Hb_000046_200--Hb_000500_210 Hb_001425_110 Hb_001425_110 Hb_000046_200--Hb_001425_110 Hb_032974_010--Hb_005714_050 Hb_032974_010--Hb_069022_010 Hb_084889_010 Hb_084889_010 Hb_032974_010--Hb_084889_010 Hb_001017_080 Hb_001017_080 Hb_032974_010--Hb_001017_080 Hb_000111_230 Hb_000111_230 Hb_032974_010--Hb_000111_230 Hb_011224_040--Hb_000500_210 Hb_002526_020 Hb_002526_020 Hb_011224_040--Hb_002526_020 Hb_000434_020 Hb_000434_020 Hb_011224_040--Hb_000434_020 Hb_004429_110 Hb_004429_110 Hb_011224_040--Hb_004429_110 Hb_021924_010 Hb_021924_010 Hb_182005_010--Hb_021924_010 Hb_001488_400 Hb_001488_400 Hb_182005_010--Hb_001488_400 Hb_182005_010--Hb_000500_210 Hb_000975_180 Hb_000975_180 Hb_182005_010--Hb_000975_180 Hb_005245_070 Hb_005245_070 Hb_182005_010--Hb_005245_070 Hb_033376_010 Hb_033376_010 Hb_182005_010--Hb_033376_010 Hb_109578_010 Hb_109578_010 Hb_005199_010--Hb_109578_010 Hb_000275_010 Hb_000275_010 Hb_005199_010--Hb_000275_010 Hb_001405_130 Hb_001405_130 Hb_005199_010--Hb_001405_130 Hb_004048_010 Hb_004048_010 Hb_005199_010--Hb_004048_010 Hb_000345_430 Hb_000345_430 Hb_005199_010--Hb_000345_430 Hb_007765_120 Hb_007765_120 Hb_005199_010--Hb_007765_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0618534 0.117667 0.289916 1.73244 0 1.11813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.79062 7.98263 0 0 0

CAGE analysis