Hb_186589_010

Information

Type -
Description -
Location Contig186589: 74-235
Sequence    

Annotation

kegg
ID vvi:100267907
description developmentally-regulated G-protein 3
nr
ID XP_010243335.1
description PREDICTED: developmentally-regulated G-protein 3 [Nelumbo nucifera]
swissprot
ID Q9SVA6
description Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana GN=DRG3 PE=1 SV=1
trembl
ID A0A068UWT9
description Coffea canephora DH200=94 genomic scaffold, scaffold_71 OS=Coffea canephora GN=GSCOC_T00037580001 PE=4 SV=1
Gene Ontology
ID GO:0005829
description developmentally-regulated g-protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186589_010 0.0 - - PREDICTED: developmentally-regulated G-protein 3 [Nelumbo nucifera]
2 Hb_095575_010 0.1996893319 - - hypothetical protein JCGZ_19529 [Jatropha curcas]
3 Hb_008406_080 0.2047191038 - - Nonspecific lipid-transfer protein 3 precursor, putative [Ricinus communis]
4 Hb_001486_210 0.205316445 - - -
5 Hb_173271_010 0.2251774207 - - Disease resistance protein RPP13, putative [Ricinus communis]
6 Hb_007894_020 0.2280435874 - - protein translation factor SUI1 homolog 2 [Jatropha curcas]
7 Hb_004994_250 0.2343183319 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB6 [Jatropha curcas]
8 Hb_101058_020 0.2384013217 - - DWNN domain isoform 2 [Theobroma cacao]
9 Hb_000926_110 0.2412266436 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
10 Hb_000260_300 0.2435756388 - - calcium binding protein/cast, putative [Ricinus communis]
11 Hb_022137_020 0.2436956954 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
12 Hb_000836_160 0.244058693 - - hypothetical protein JCGZ_14366 [Jatropha curcas]
13 Hb_033327_010 0.2441624867 - - SYM8 [Pisum sativum]
14 Hb_004021_090 0.2477157321 - - hypothetical protein JCGZ_09233 [Jatropha curcas]
15 Hb_113676_010 0.2509088585 - - PREDICTED: disease resistance protein RPM1-like isoform X1 [Populus euphratica]
16 Hb_124677_020 0.2570010074 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
17 Hb_082225_010 0.2606121522 - - DWNN domain isoform 2 [Theobroma cacao]
18 Hb_155946_030 0.2623820377 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
19 Hb_002982_030 0.2654838181 - - Chalcone synthase, putative [Ricinus communis]
20 Hb_002445_130 0.2671290006 - - Disease resistance protein RGA2, putative [Ricinus communis]

Gene co-expression network

sample Hb_186589_010 Hb_186589_010 Hb_095575_010 Hb_095575_010 Hb_186589_010--Hb_095575_010 Hb_008406_080 Hb_008406_080 Hb_186589_010--Hb_008406_080 Hb_001486_210 Hb_001486_210 Hb_186589_010--Hb_001486_210 Hb_173271_010 Hb_173271_010 Hb_186589_010--Hb_173271_010 Hb_007894_020 Hb_007894_020 Hb_186589_010--Hb_007894_020 Hb_004994_250 Hb_004994_250 Hb_186589_010--Hb_004994_250 Hb_033327_010 Hb_033327_010 Hb_095575_010--Hb_033327_010 Hb_000926_110 Hb_000926_110 Hb_095575_010--Hb_000926_110 Hb_000594_110 Hb_000594_110 Hb_095575_010--Hb_000594_110 Hb_003913_030 Hb_003913_030 Hb_095575_010--Hb_003913_030 Hb_000836_160 Hb_000836_160 Hb_095575_010--Hb_000836_160 Hb_008406_080--Hb_007894_020 Hb_101058_020 Hb_101058_020 Hb_008406_080--Hb_101058_020 Hb_002982_030 Hb_002982_030 Hb_008406_080--Hb_002982_030 Hb_008406_080--Hb_173271_010 Hb_001268_060 Hb_001268_060 Hb_008406_080--Hb_001268_060 Hb_022137_020 Hb_022137_020 Hb_008406_080--Hb_022137_020 Hb_004021_090 Hb_004021_090 Hb_001486_210--Hb_004021_090 Hb_009979_010 Hb_009979_010 Hb_001486_210--Hb_009979_010 Hb_010994_020 Hb_010994_020 Hb_001486_210--Hb_010994_020 Hb_002007_070 Hb_002007_070 Hb_001486_210--Hb_002007_070 Hb_183192_010 Hb_183192_010 Hb_001486_210--Hb_183192_010 Hb_164577_010 Hb_164577_010 Hb_001486_210--Hb_164577_010 Hb_001775_090 Hb_001775_090 Hb_173271_010--Hb_001775_090 Hb_000162_130 Hb_000162_130 Hb_173271_010--Hb_000162_130 Hb_005048_120 Hb_005048_120 Hb_173271_010--Hb_005048_120 Hb_001459_040 Hb_001459_040 Hb_173271_010--Hb_001459_040 Hb_002133_010 Hb_002133_010 Hb_173271_010--Hb_002133_010 Hb_064885_010 Hb_064885_010 Hb_173271_010--Hb_064885_010 Hb_007894_020--Hb_101058_020 Hb_007894_020--Hb_022137_020 Hb_158926_010 Hb_158926_010 Hb_007894_020--Hb_158926_010 Hb_002542_030 Hb_002542_030 Hb_007894_020--Hb_002542_030 Hb_155946_030 Hb_155946_030 Hb_007894_020--Hb_155946_030 Hb_124677_020 Hb_124677_020 Hb_007894_020--Hb_124677_020 Hb_031822_010 Hb_031822_010 Hb_004994_250--Hb_031822_010 Hb_004631_200 Hb_004631_200 Hb_004994_250--Hb_004631_200 Hb_000072_190 Hb_000072_190 Hb_004994_250--Hb_000072_190 Hb_001769_110 Hb_001769_110 Hb_004994_250--Hb_001769_110 Hb_000003_240 Hb_000003_240 Hb_004994_250--Hb_000003_240 Hb_013358_020 Hb_013358_020 Hb_004994_250--Hb_013358_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
242.644 1108.53 869 620.791 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
154.44 150.71 0 0 0

CAGE analysis