Hb_186982_010

Information

Type -
Description -
Location Contig186982: 906-2053
Sequence    

Annotation

kegg
ID cmo:103490604
description uncharacterized LOC103490604
nr
ID XP_009630252.1
description PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID M1DF56
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037635 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_186982_010 0.0 - - PREDICTED: uncharacterized protein LOC104120222 [Nicotiana tomentosiformis]
2 Hb_007753_010 0.2121430002 - - -
3 Hb_132303_010 0.2777110531 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_070926_010 0.2793661083 - - PREDICTED: mRNA-decapping enzyme subunit 2-like [Populus euphratica]
5 Hb_001766_100 0.279999849 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
6 Hb_000951_040 0.2846718034 transcription factor TF Family: M-type hypothetical protein JCGZ_09931 [Jatropha curcas]
7 Hb_000948_100 0.2928810377 - - -
8 Hb_010417_010 0.2941357589 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_001005_070 0.294669337 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF113-like [Jatropha curcas]
10 Hb_001100_010 0.2973049103 - - F-box/FBD/LRR-repeat protein [Medicago truncatula]
11 Hb_002028_100 0.298417117 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
12 Hb_067188_010 0.2998831872 - - -
13 Hb_014549_020 0.3021673446 - - hypothetical protein POPTR_0013s12350g [Populus trichocarpa]
14 Hb_004324_350 0.302517196 - - PREDICTED: uncharacterized protein LOC103484146 [Cucumis melo]
15 Hb_003069_020 0.3026470736 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004225_150 0.3078357724 transcription factor TF Family: C3H PREDICTED: zinc finger protein 36, C3H1 type-like 3 [Jatropha curcas]
17 Hb_025457_010 0.3111810558 - - -
18 Hb_001014_120 0.3117915967 transcription factor TF Family: ERF ethylene-responsive transcription factor ERF113 [Jatropha curcas]
19 Hb_005532_010 0.3118798969 - - -
20 Hb_009421_010 0.3134469055 - - -

Gene co-expression network

sample Hb_186982_010 Hb_186982_010 Hb_007753_010 Hb_007753_010 Hb_186982_010--Hb_007753_010 Hb_132303_010 Hb_132303_010 Hb_186982_010--Hb_132303_010 Hb_070926_010 Hb_070926_010 Hb_186982_010--Hb_070926_010 Hb_001766_100 Hb_001766_100 Hb_186982_010--Hb_001766_100 Hb_000951_040 Hb_000951_040 Hb_186982_010--Hb_000951_040 Hb_000948_100 Hb_000948_100 Hb_186982_010--Hb_000948_100 Hb_007753_010--Hb_000951_040 Hb_001005_070 Hb_001005_070 Hb_007753_010--Hb_001005_070 Hb_004871_050 Hb_004871_050 Hb_007753_010--Hb_004871_050 Hb_002739_110 Hb_002739_110 Hb_007753_010--Hb_002739_110 Hb_011640_020 Hb_011640_020 Hb_007753_010--Hb_011640_020 Hb_013925_010 Hb_013925_010 Hb_132303_010--Hb_013925_010 Hb_000029_270 Hb_000029_270 Hb_132303_010--Hb_000029_270 Hb_001014_120 Hb_001014_120 Hb_132303_010--Hb_001014_120 Hb_004048_060 Hb_004048_060 Hb_132303_010--Hb_004048_060 Hb_008516_020 Hb_008516_020 Hb_132303_010--Hb_008516_020 Hb_000866_150 Hb_000866_150 Hb_070926_010--Hb_000866_150 Hb_128558_010 Hb_128558_010 Hb_070926_010--Hb_128558_010 Hb_070926_010--Hb_001766_100 Hb_003069_020 Hb_003069_020 Hb_070926_010--Hb_003069_020 Hb_096225_020 Hb_096225_020 Hb_070926_010--Hb_096225_020 Hb_011909_040 Hb_011909_040 Hb_070926_010--Hb_011909_040 Hb_002983_030 Hb_002983_030 Hb_001766_100--Hb_002983_030 Hb_014549_020 Hb_014549_020 Hb_001766_100--Hb_014549_020 Hb_000193_240 Hb_000193_240 Hb_001766_100--Hb_000193_240 Hb_004453_140 Hb_004453_140 Hb_001766_100--Hb_004453_140 Hb_152439_020 Hb_152439_020 Hb_001766_100--Hb_152439_020 Hb_001100_010 Hb_001100_010 Hb_001766_100--Hb_001100_010 Hb_000421_190 Hb_000421_190 Hb_000951_040--Hb_000421_190 Hb_000951_040--Hb_004871_050 Hb_001396_230 Hb_001396_230 Hb_000951_040--Hb_001396_230 Hb_000951_040--Hb_008516_020 Hb_001153_220 Hb_001153_220 Hb_000951_040--Hb_001153_220 Hb_028486_070 Hb_028486_070 Hb_000948_100--Hb_028486_070 Hb_000350_080 Hb_000350_080 Hb_000948_100--Hb_000350_080 Hb_007808_020 Hb_007808_020 Hb_000948_100--Hb_007808_020 Hb_001959_150 Hb_001959_150 Hb_000948_100--Hb_001959_150 Hb_005072_010 Hb_005072_010 Hb_000948_100--Hb_005072_010 Hb_000068_030 Hb_000068_030 Hb_000948_100--Hb_000068_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0291408 0 0 0 0.0273334 0.0704143
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.052715 0.190799 0.064 0

CAGE analysis