Hb_187021_010

Information

Type -
Description -
Location Contig187021: 1-1247
Sequence    

Annotation

kegg
ID cit:102623211
description putative disease resistance protein RGA1-like
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID Q7XBQ9
description Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187021_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_083493_010 0.1647932791 - - Disease resistance protein RPS5, putative [Ricinus communis]
3 Hb_035761_010 0.1725793152 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
4 Hb_000422_130 0.1850387905 - - hypothetical protein JCGZ_15217 [Jatropha curcas]
5 Hb_001688_070 0.1853730911 - - PREDICTED: L-Ala-D/L-amino acid epimerase isoform X1 [Jatropha curcas]
6 Hb_000099_190 0.1866457876 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
7 Hb_005016_020 0.1882236577 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
8 Hb_000914_050 0.1887993246 - - PREDICTED: serine/threonine-protein kinase UCNL [Jatropha curcas]
9 Hb_025615_010 0.1914291502 - - hypothetical protein JCGZ_19555 [Jatropha curcas]
10 Hb_160405_010 0.1952120605 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
11 Hb_001754_060 0.2086565571 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
12 Hb_000172_230 0.2110384936 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
13 Hb_000732_240 0.2118145431 - - PREDICTED: dynein light chain 1, cytoplasmic-like [Jatropha curcas]
14 Hb_009745_010 0.2149727428 - - cellulose synthase-like protein [Populus tomentosa]
15 Hb_017159_010 0.2169848394 - - -
16 Hb_000011_070 0.2170271929 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
17 Hb_001595_040 0.2198061464 - - Root phototropism protein, putative [Ricinus communis]
18 Hb_004449_090 0.2199441697 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
19 Hb_154538_010 0.2209244004 - - -
20 Hb_049915_010 0.2218740772 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]

Gene co-expression network

sample Hb_187021_010 Hb_187021_010 Hb_083493_010 Hb_083493_010 Hb_187021_010--Hb_083493_010 Hb_035761_010 Hb_035761_010 Hb_187021_010--Hb_035761_010 Hb_000422_130 Hb_000422_130 Hb_187021_010--Hb_000422_130 Hb_001688_070 Hb_001688_070 Hb_187021_010--Hb_001688_070 Hb_000099_190 Hb_000099_190 Hb_187021_010--Hb_000099_190 Hb_005016_020 Hb_005016_020 Hb_187021_010--Hb_005016_020 Hb_083493_010--Hb_001688_070 Hb_009745_010 Hb_009745_010 Hb_083493_010--Hb_009745_010 Hb_000203_070 Hb_000203_070 Hb_083493_010--Hb_000203_070 Hb_012308_050 Hb_012308_050 Hb_083493_010--Hb_012308_050 Hb_000363_180 Hb_000363_180 Hb_083493_010--Hb_000363_180 Hb_035761_010--Hb_000099_190 Hb_000732_240 Hb_000732_240 Hb_035761_010--Hb_000732_240 Hb_101370_010 Hb_101370_010 Hb_035761_010--Hb_101370_010 Hb_154538_010 Hb_154538_010 Hb_035761_010--Hb_154538_010 Hb_048944_020 Hb_048944_020 Hb_035761_010--Hb_048944_020 Hb_000818_100 Hb_000818_100 Hb_000422_130--Hb_000818_100 Hb_003029_060 Hb_003029_060 Hb_000422_130--Hb_003029_060 Hb_003605_040 Hb_003605_040 Hb_000422_130--Hb_003605_040 Hb_003929_190 Hb_003929_190 Hb_000422_130--Hb_003929_190 Hb_001595_040 Hb_001595_040 Hb_000422_130--Hb_001595_040 Hb_000062_490 Hb_000062_490 Hb_001688_070--Hb_000062_490 Hb_000567_350 Hb_000567_350 Hb_001688_070--Hb_000567_350 Hb_008112_010 Hb_008112_010 Hb_001688_070--Hb_008112_010 Hb_012743_010 Hb_012743_010 Hb_001688_070--Hb_012743_010 Hb_000099_190--Hb_000732_240 Hb_049915_010 Hb_049915_010 Hb_000099_190--Hb_049915_010 Hb_000438_150 Hb_000438_150 Hb_000099_190--Hb_000438_150 Hb_000914_050 Hb_000914_050 Hb_000099_190--Hb_000914_050 Hb_001103_070 Hb_001103_070 Hb_000099_190--Hb_001103_070 Hb_000000_110 Hb_000000_110 Hb_005016_020--Hb_000000_110 Hb_001898_020 Hb_001898_020 Hb_005016_020--Hb_001898_020 Hb_001178_080 Hb_001178_080 Hb_005016_020--Hb_001178_080 Hb_160405_010 Hb_160405_010 Hb_005016_020--Hb_160405_010 Hb_012727_010 Hb_012727_010 Hb_005016_020--Hb_012727_010 Hb_000220_080 Hb_000220_080 Hb_005016_020--Hb_000220_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.39793 3.04692 2.1049 6.51743 0.162237 1.11696
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.564921 0.907659 0.86349

CAGE analysis