Hb_187083_010

Information

Type -
Description -
Location Contig187083: 221-495
Sequence    

Annotation

kegg
ID cmo:103496906
description uncharacterized LOC103496906
nr
ID XP_012084603.1
description PREDICTED: uncharacterized protein LOC105643971 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K530
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20189 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187083_010 0.0 - - PREDICTED: uncharacterized protein LOC105643971 [Jatropha curcas]
2 Hb_000367_210 0.0675680082 - - PREDICTED: dolichol-phosphate mannosyltransferase subunit 3 [Jatropha curcas]
3 Hb_003561_030 0.0697128111 - - PREDICTED: uncharacterized protein LOC105645274 [Jatropha curcas]
4 Hb_000236_460 0.0831262934 - - PREDICTED: uncharacterized protein LOC105633119 isoform X1 [Jatropha curcas]
5 Hb_000163_130 0.083967457 - - hypothetical protein CICLE_v10022870mg [Citrus clementina]
6 Hb_021409_090 0.0844344287 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0003s14450g [Populus trichocarpa]
7 Hb_011161_050 0.087225427 - - PREDICTED: uncharacterized protein LOC105127832 isoform X2 [Populus euphratica]
8 Hb_002843_210 0.0964518738 - - PREDICTED: uncharacterized protein LOC105647178 [Jatropha curcas]
9 Hb_000199_070 0.096746284 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002320_060 0.0995825319 - - hypothetical protein CARUB_v10018269mg, partial [Capsella rubella]
11 Hb_014834_030 0.1011988762 - - -
12 Hb_001780_050 0.1023827686 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2 [Jatropha curcas]
13 Hb_005914_200 0.1025624486 - - PREDICTED: 60S ribosomal protein L23-like isoform X1 [Tarenaya hassleriana]
14 Hb_000085_330 0.1046724372 - - PREDICTED: 40S ribosomal protein S8 [Jatropha curcas]
15 Hb_004754_070 0.1056749204 - - PREDICTED: 60S ribosomal protein L30-like [Gossypium raimondii]
16 Hb_000722_040 0.1068658821 - - -
17 Hb_000975_110 0.1093174557 - - PREDICTED: ubiquitin-conjugating enzyme E2 7 [Jatropha curcas]
18 Hb_004041_040 0.1099493751 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-1 [Camelina sativa]
19 Hb_000236_150 0.1100226385 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
20 Hb_002835_320 0.1105758636 - - 60S ribosomal protein L27B [Hevea brasiliensis]

Gene co-expression network

sample Hb_187083_010 Hb_187083_010 Hb_000367_210 Hb_000367_210 Hb_187083_010--Hb_000367_210 Hb_003561_030 Hb_003561_030 Hb_187083_010--Hb_003561_030 Hb_000236_460 Hb_000236_460 Hb_187083_010--Hb_000236_460 Hb_000163_130 Hb_000163_130 Hb_187083_010--Hb_000163_130 Hb_021409_090 Hb_021409_090 Hb_187083_010--Hb_021409_090 Hb_011161_050 Hb_011161_050 Hb_187083_010--Hb_011161_050 Hb_000367_210--Hb_000163_130 Hb_001780_050 Hb_001780_050 Hb_000367_210--Hb_001780_050 Hb_000367_210--Hb_003561_030 Hb_000820_130 Hb_000820_130 Hb_000367_210--Hb_000820_130 Hb_005914_200 Hb_005914_200 Hb_000367_210--Hb_005914_200 Hb_000722_040 Hb_000722_040 Hb_003561_030--Hb_000722_040 Hb_003561_030--Hb_011161_050 Hb_000975_110 Hb_000975_110 Hb_003561_030--Hb_000975_110 Hb_000272_070 Hb_000272_070 Hb_003561_030--Hb_000272_070 Hb_003549_020 Hb_003549_020 Hb_000236_460--Hb_003549_020 Hb_000236_460--Hb_021409_090 Hb_097007_010 Hb_097007_010 Hb_000236_460--Hb_097007_010 Hb_000085_330 Hb_000085_330 Hb_000236_460--Hb_000085_330 Hb_001123_120 Hb_001123_120 Hb_000236_460--Hb_001123_120 Hb_000163_130--Hb_001780_050 Hb_002835_320 Hb_002835_320 Hb_000163_130--Hb_002835_320 Hb_000905_180 Hb_000905_180 Hb_000163_130--Hb_000905_180 Hb_004754_070 Hb_004754_070 Hb_000163_130--Hb_004754_070 Hb_000236_150 Hb_000236_150 Hb_000163_130--Hb_000236_150 Hb_003053_030 Hb_003053_030 Hb_000163_130--Hb_003053_030 Hb_002217_450 Hb_002217_450 Hb_021409_090--Hb_002217_450 Hb_000199_070 Hb_000199_070 Hb_021409_090--Hb_000199_070 Hb_021409_090--Hb_011161_050 Hb_021409_090--Hb_003561_030 Hb_010812_010 Hb_010812_010 Hb_011161_050--Hb_010812_010 Hb_011161_050--Hb_000975_110 Hb_000364_020 Hb_000364_020 Hb_011161_050--Hb_000364_020 Hb_011161_050--Hb_000199_070 Hb_000086_550 Hb_000086_550 Hb_011161_050--Hb_000086_550
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.3702 9.60259 8.81143 52.7836 21.3299 79.8647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
121.185 219.725 90.7457 38.2413 8.70924

CAGE analysis