Hb_187739_010

Information

Type -
Description -
Location Contig187739: 12504-13343
Sequence    

Annotation

kegg
ID rcu:RCOM_1113060
description leucine-rich repeat receptor protein kinase exs precursor, putative (EC:1.3.1.74)
nr
ID XP_002531725.1
description leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
swissprot
ID Q9ZPS9
description Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1
trembl
ID B9T0F6
description Leucine-rich repeat receptor protein kinase exs, putative OS=Ricinus communis GN=RCOM_1113060 PE=4 SV=1
Gene Ontology
ID GO:0016491
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_187739_010 0.0 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
2 Hb_000988_010 0.1196884373 - - hypothetical protein POPTR_0004s17730g [Populus trichocarpa]
3 Hb_172983_010 0.1537989705 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002163_070 0.1641995316 - - hypothetical protein JCGZ_13728 [Jatropha curcas]
5 Hb_010252_010 0.1645960113 - - -
6 Hb_009083_020 0.1654870637 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
7 Hb_160950_010 0.1678724103 - - PREDICTED: uncharacterized protein LOC105761043 [Gossypium raimondii]
8 Hb_045985_010 0.1692333982 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
9 Hb_137862_020 0.1706650346 - - Leucine-rich repeat receptor protein kinase EXS precursor, putative [Ricinus communis]
10 Hb_019733_020 0.1713757025 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
11 Hb_119583_030 0.172578435 - - unnamed protein product [Vitis vinifera]
12 Hb_000248_080 0.1745494786 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_006615_110 0.1760327174 transcription factor TF Family: bZIP hypothetical protein JCGZ_11777 [Jatropha curcas]
14 Hb_000025_800 0.1769745799 - - hypothetical protein VITISV_020143 [Vitis vinifera]
15 Hb_057721_010 0.1782570914 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
16 Hb_185437_010 0.1785008935 - - PREDICTED: uncharacterized protein LOC105637003 [Jatropha curcas]
17 Hb_039440_010 0.1794701579 - - conserved hypothetical protein [Ricinus communis]
18 Hb_136973_020 0.1852455024 - - -
19 Hb_001518_050 0.1854873861 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
20 Hb_001032_080 0.1870067645 - - Ankyrin repeat protein [Medicago truncatula]

Gene co-expression network

sample Hb_187739_010 Hb_187739_010 Hb_000988_010 Hb_000988_010 Hb_187739_010--Hb_000988_010 Hb_172983_010 Hb_172983_010 Hb_187739_010--Hb_172983_010 Hb_002163_070 Hb_002163_070 Hb_187739_010--Hb_002163_070 Hb_010252_010 Hb_010252_010 Hb_187739_010--Hb_010252_010 Hb_009083_020 Hb_009083_020 Hb_187739_010--Hb_009083_020 Hb_160950_010 Hb_160950_010 Hb_187739_010--Hb_160950_010 Hb_006615_110 Hb_006615_110 Hb_000988_010--Hb_006615_110 Hb_045985_010 Hb_045985_010 Hb_000988_010--Hb_045985_010 Hb_019733_020 Hb_019733_020 Hb_000988_010--Hb_019733_020 Hb_002675_210 Hb_002675_210 Hb_000988_010--Hb_002675_210 Hb_001518_050 Hb_001518_050 Hb_000988_010--Hb_001518_050 Hb_000248_080 Hb_000248_080 Hb_172983_010--Hb_000248_080 Hb_137862_020 Hb_137862_020 Hb_172983_010--Hb_137862_020 Hb_136973_020 Hb_136973_020 Hb_172983_010--Hb_136973_020 Hb_023712_020 Hb_023712_020 Hb_172983_010--Hb_023712_020 Hb_000277_030 Hb_000277_030 Hb_172983_010--Hb_000277_030 Hb_005928_010 Hb_005928_010 Hb_172983_010--Hb_005928_010 Hb_002163_070--Hb_010252_010 Hb_002163_070--Hb_009083_020 Hb_002163_070--Hb_137862_020 Hb_002163_070--Hb_160950_010 Hb_119583_030 Hb_119583_030 Hb_002163_070--Hb_119583_030 Hb_002163_070--Hb_000248_080 Hb_010252_010--Hb_009083_020 Hb_010252_010--Hb_160950_010 Hb_010252_010--Hb_119583_030 Hb_000025_800 Hb_000025_800 Hb_010252_010--Hb_000025_800 Hb_185437_010 Hb_185437_010 Hb_010252_010--Hb_185437_010 Hb_009083_020--Hb_160950_010 Hb_009083_020--Hb_000248_080 Hb_009083_020--Hb_137862_020 Hb_039440_010 Hb_039440_010 Hb_009083_020--Hb_039440_010 Hb_160950_010--Hb_039440_010 Hb_160950_010--Hb_000248_080 Hb_160950_010--Hb_185437_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0832839 0.168111 0.212226 0.0258252 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis